Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Periplasmic serine proteases (ClpP class) from Kangiella aquimarina DSM 16071

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 61/196 (31%), Positives = 105/196 (53%), Gaps = 18/196 (9%)

Query: 367 VVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTT 426
           V++R++SPGG   +  +  ++++ ++ AG  + +++  +AASGGY ++  AD++VA P  
Sbjct: 171 VMVRLESPGGLVHSYGLAASQLKRVRDAGLKLTIAVDQVAASGGYMMACVADELVAAPFA 230

Query: 427 LTGSIGIFSVITTFEKGLNNLGI----YTDG--VGTTPFSGQGLTTGLTQGAKDAIQLGI 480
           + GSIG+ + I  F + L    I    +T G    T    GQ  T      A++  +  +
Sbjct: 231 VVGSIGVVAEIPNFNRLLQKANIDYEQHTAGQYKRTLTMFGQNTTV-----AREKFKQEL 285

Query: 481 EHGYQRFISLVAEKR-GLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLA 539
           E  +Q F + + E R  L L   D++A G  W  + A  LGLVD++   DD +  A  L 
Sbjct: 286 EETHQLFKTFIHENRPNLDL---DKVATGEHWYGRQAFELGLVDKIQTSDDVILDA--LN 340

Query: 540 QLDQYNL-YWVEEPLT 554
            +D Y++ Y + +PLT
Sbjct: 341 SMDVYSIKYEIRKPLT 356



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 26/180 (14%)

Query: 143 KPVFAVGDFYNQSQYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHVFRV 202
           K   AV        Y +A  AD++  AP   V   G  A    +  LL+K ++       
Sbjct: 201 KLTIAVDQVAASGGYMMACVADELVAAPFAVVGSIGVVAEIPNFNRLLQKANIDYEQHTA 260

Query: 203 GTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANR-QIEIKTLTPSMEQFVAQ 261
           G YK  +  F ++  +  ARE   + L +    +   +  NR  +++  +      +  Q
Sbjct: 261 GQYKRTLTMFGQN--TTVAREKFKQELEETHQLFKTFIHENRPNLDLDKVATGEHWYGRQ 318

Query: 262 LKEVNGDLAALSKKVGLVDELATRQQVRQTLAETFGSDGKDSYNAIGYYEYKTTI-KPTT 320
             E           +GLVD++ T   V             D+ N++  Y  K  I KP T
Sbjct: 319 AFE-----------LGLVDKIQTSDDVI-----------LDALNSMDVYSIKYEIRKPLT 356