Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., capsid assembly protein from Escherichia coli ECRC98

 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 15/222 (6%)

Query: 325 NDIAVVVASGAIMDGS---QP-RGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFA 380
           N IAV+  SG ++  +   QP  G  G + +   L++A +D  V  ++L +D+PGG    
Sbjct: 80  NGIAVLPVSGTLVSRTRALQPYSGMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAG 139

Query: 381 SEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTF 440
           +    + I  ++   KPV    + +  S G  ++ +A + +   T  TGSIG+    + +
Sbjct: 140 AFDCADIIARVRDI-KPVWALANDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNY 198

Query: 441 EKGLNNLGIYTDGVGTTPFSGQGLTTG-----LTQGAKDAIQLGIEHGYQRFISLVAEKR 495
              L   G+      T  +SG     G     L    ++ +Q  ++   + F   V+   
Sbjct: 199 GAALEKQGVEI----TLIYSGSHKVDGNPYSHLPGDVRETLQSRMDATRRMFAQKVSAYT 254

Query: 496 GLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAAD 537
           GL+++AV +  +  V++ Q+A   GL D+L +  DA+ +  D
Sbjct: 255 GLSVQAVLD-TEAAVYSGQEAIDAGLADELVNSTDAITVMRD 295