Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., signal peptide peptidase SppA from Dickeya dianthicola ME23

 Score =  559 bits (1440), Expect = e-163
 Identities = 305/623 (48%), Positives = 411/623 (65%), Gaps = 21/623 (3%)

Query: 1   MKSLFRFVGLILKGIWKAITFIRLALTNL--IFLLSIGIIYFIYVHADAPLPTMDKSSAL 58
           M++++R    I +  W+ + FIR  + NL  +FL+ +GI  +  +      P      AL
Sbjct: 1   MRTMWRIFSGIFRWGWRLLNFIREFILNLFLVFLILVGIGVYSQLKTPQAEPPR---GAL 57

Query: 59  VLNLSGPIVEQSTHINPMDSFTGSVFGEELPR--ENVLFDIVETLRHAKNDNNVTGLVLA 116
           +L+L+G +V++ +  N +  F    FG    R  EN LFDIV+ +R AK+D+N+TG+V+ 
Sbjct: 58  LLDLTGVVVDKPSVNNKLRQFGREFFGVSASRHQENALFDIVDGIRQAKDDSNITGMVMD 117

Query: 117 LGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQSQYYLASYADKIYLAPDGAVLL 176
           L D    +   L+YI KA+ EF+ +GKP+FAVGD +NQ+QYYLAS+A+KIYL P G + L
Sbjct: 118 LSDFVSADQPSLQYIGKALREFRDAGKPIFAVGDNFNQTQYYLASFANKIYLTPQGNIDL 177

Query: 177 KGYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAY 236
           +G++  ++YYKTLL+KL VTTH+FRVGTYKSA+EPF+RDDMS  ARE+ SRW++ LW  Y
Sbjct: 178 QGFATNNLYYKTLLDKLKVTTHIFRVGTYKSAVEPFIRDDMSPDAREADSRWISTLWQHY 237

Query: 237 VDDVAANRQIEIKTLTPSMEQFVAQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAETF 296
           +D VAANRQI  + L P  E  +A L+ +NGD A  + +  LVDE+A+R  + Q+  + F
Sbjct: 238 LDTVAANRQITPQQLFPGAENLLAGLQALNGDTARYALENKLVDEVASRAAIEQSFIKAF 297

Query: 297 GSDGKD-SYNAIGYYEYKTTIKPTTLTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLL 355
           G D K  + N    Y+Y  T      T AN+IAVV A+G I+DG +  G VGGDT A  +
Sbjct: 298 GWDAKSKNVNFTSIYDYAPT---PPATSANEIAVVFANGTIVDGKETPGYVGGDTTAAQI 354

Query: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415
           R+AR D  VKA+VLRV+SPGGS  ASE+IR+E+ A + AGKPVVVSM  +AASGGYWIS 
Sbjct: 355 RDARLDPKVKAIVLRVNSPGGSVTASELIRSELAAARQAGKPVVVSMGGMAASGGYWIST 414

Query: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475
            A+ I+A P+TLTGSIGIF V+TTFE  L+++G++TDGV T+P +    T  L   A   
Sbjct: 415 PANAIIASPSTLTGSIGIFGVVTTFENSLDSIGVHTDGVATSPLAALSQTRALPTEASQL 474

Query: 476 IQLGIEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLA 535
           +QL IE GYQ FISLVAE R  T + VD +AQG VW   DA+T GLVDQLGDFDDAV  A
Sbjct: 475 MQLNIERGYQNFISLVAESRKKTPQEVDAIAQGHVWVGSDAKTNGLVDQLGDFDDAVKKA 534

Query: 536 ADLAQLDQYNLYWVE-EPLTPAQQFLQDLLGQVRVS----LGLDVSTLLPKSLQPLAVEW 590
           A+LA+L+ Y L W   EP      FL  +  QVR S    L   +  ++P  +  LA   
Sbjct: 535 AELAKLEHYQLSWYSGEP-----AFLDTMFSQVRSSVYAMLPSALQAIVPAPVAQLAQTV 589

Query: 591 QQQTSLLNQLNDPKGQYAFCLPC 613
           + QTS+L+ LNDP+ +YA CL C
Sbjct: 590 RAQTSVLDALNDPQNRYALCLNC 612