Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 15/210 (7%)

Query: 327 IAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEVIRN 386
           ++VV  +G I  G   R  +    VA LL  A    + KAV L V+SPGGS   S +I  
Sbjct: 22  VSVVRLTGVIGQGGPLRSGLTLAGVAPLLERAFAPKDQKAVALIVNSPGGSPVQSALIAK 81

Query: 387 EIEALKAAGK-PVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGI----FSVITTFE 441
            I  L    K PV       AASGGYW++ +AD+I A  +++ GSIG+    F +    E
Sbjct: 82  RIRDLAEEKKLPVFAFCEDAAASGGYWLACAADEIWADESSIVGSIGVVSSGFGLHGLIE 141

Query: 442 KGLNNLGIYTDG---VGTTPFSGQGLTTGLTQGAKDAIQLGIEHGYQRFISLVAEKRGLT 498
           +      +YT G   V   PFS +    G+      A+Q  +   ++ F ++V  +RG  
Sbjct: 142 RHGIERRLYTAGDKKVLLDPFSPE-REDGVAH--LKALQADV---HEAFKAMVRSRRGSR 195

Query: 499 LKA-VDELAQGRVWTAQDAQTLGLVDQLGD 527
           L    +EL  G  W  + A  LGL+D LGD
Sbjct: 196 LTGPEEELFSGAFWAGRRALALGLIDGLGD 225



 Score = 28.9 bits (63), Expect = 3e-04
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 5/111 (4%)

Query: 104 AKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGK-PVFAV-GDFYNQSQYYLAS 161
           A  D     L++   + P  +  +   IAK I +     K PVFA   D      Y+LA 
Sbjct: 55  APKDQKAVALIV---NSPGGSPVQSALIAKRIRDLAEEKKLPVFAFCEDAAASGGYWLAC 111

Query: 162 YADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPF 212
            AD+I+      V   G  +       L+E+  +   ++  G  K  ++PF
Sbjct: 112 AADEIWADESSIVGSIGVVSSGFGLHGLIERHGIERRLYTAGDKKVLLDPF 162