Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 696 a.a., DinG family ATP-dependent helicase YoaA from Variovorax sp. SCN45

 Score =  426 bits (1096), Expect = e-123
 Identities = 261/675 (38%), Positives = 360/675 (53%), Gaps = 57/675 (8%)

Query: 2   IEKTFSQQGALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPAL 61
           +   F+Q GAL +A   F+ R  Q +MA AVA  I     LVVEAGTG GKTF+YLVPAL
Sbjct: 9   VRDAFAQDGALSRAAEQFRERSGQTEMAMAVARTIDQGGVLVVEAGTGVGKTFSYLVPAL 68

Query: 62  LSGKKVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESH 121
           LSG++V++ST +K LQ+QLF RDLP +V A G   + ALLKGR +YLCL RL     ++ 
Sbjct: 69  LSGERVLLSTATKTLQDQLFGRDLPRLVEAFGLPVRTALLKGRGSYLCLHRLDTARHDAS 128

Query: 122 TPESDPTLLTQLVKVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECASYQD 181
            PE     L  L K+  W+ +T++GDL E   L E SP+IP ITST +NCLG +C  ++ 
Sbjct: 129 LPERGS--LRTLAKIEQWSKATRTGDLAELPGLDERSPLIPLITSTRENCLGAQCPQFKA 186

Query: 182 CFVSKARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIASQYF 241
           C V+ ARR A+ AD+VV+NHHLF ADLA++ETG  EL+P   V +FDEAHQL +   Q+ 
Sbjct: 187 CHVNLARREALAADIVVINHHLFFADLAVRETGMAELLPTVSVVVFDEAHQLNETGVQFL 246

Query: 242 GQSVSSRQVQDLAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIVLGE--PGYRGNW- 298
           G  + S Q  D A+D+       A+ +   Q++   + + A +LR+V+G+  PG +  W 
Sbjct: 247 GAQLGSGQALDFARDMLGSGLQHARGLVDWQQLVSGVERTARELRLVVGKQWPGAKLRWL 306

Query: 299 ---REVLKVPTVAREVERLNEALQFALDVLKLALGRSQLLDTAFERATLILGRIRRVCDV 355
               E +        ++ L  + + A + L      S       ERA  +  R  R    
Sbjct: 307 GPAPEGIDPDAWQSALDDLQHSFEQAAEGLATVSEISPDFVRLHERARQLAKRTARFALP 366

Query: 356 SVTGYSYWYDTTPRHFSLHITPLSVADKFREQI----------ALKEG------------ 393
                  W D   +   L  +PL +AD  R+++          A  +G            
Sbjct: 367 CEVDSVRWVDVGSQ-LRLIESPLDIADAMRKRVLKIVDEAGADADDDGDDSDDELDAYGE 425

Query: 394 --------------AWIFTSATLAVNEDFSHFTERLGLTPSAQFSLVSPFDYQQQAVLCV 439
                         AW+FTSATL        FTE  GL  +    + SPFDY  QA L V
Sbjct: 426 RSAREAPVQEDGGRAWVFTSATLGDEPTLRWFTEPCGLHDAEVLRVQSPFDYASQAALYV 485

Query: 440 PRYLPEPNSSGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERFRERLTL------ 493
           PR  P+PN    ++++ ++ A       GR   L T+   +R +G+  +++  L      
Sbjct: 486 PRAFPKPNDPSHSQRVAQLAARGAAELGGRTLVLTTTLRALRTIGDAIKQQFELLETEAR 545

Query: 494 -PVLMQGETSKQKTLAEFMELGNA-----LLVATGAFWEGIDVRGDTLSCVIIDKLPFTA 547
             VL+QGE  K+  +  F E  +A     +LVA+ +FWEG D  GD L  V+IDKLPF  
Sbjct: 546 PEVLVQGELPKRVLMDRFREGASAGRAGCVLVASASFWEGFDAPGDALQLVVIDKLPFPP 605

Query: 548 PDDPLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLVTR 607
           P+DPL++AR +    +G   FA   LPEA + LKQG GRLIR + D G L ICD RLV  
Sbjct: 606 PNDPLVEARSQRLEAQGRSSFADYSLPEAAVALKQGAGRLIRRETDSGVLAICDTRLVAM 665

Query: 608 DYGGVFLASLPPIPR 622
            YG   LA+LPP+ R
Sbjct: 666 GYGRRLLAALPPMRR 680