Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., DinG family ATP-dependent helicase YoaA from Sphingobium sp. HT1-2

 Score =  104 bits (259), Expect = 2e-26
 Identities = 91/314 (28%), Positives = 136/314 (43%), Gaps = 48/314 (15%)

Query: 17  PGFQPRQAQVDMAKAVASAIANQSQ------LVVEAGTGTGKTFAYLVPALLSGKK---- 66
           PG +PR  Q   A A   A   ++       L+ EAGTG GKT  YL PA L   +    
Sbjct: 193 PGAEPRPGQRAYAAAAMEAFRPRTHRDQPNMLLAEAGTGIGKTLGYLAPASLWAAQAQGT 252

Query: 67  VIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESHTPESD 126
           V IST +K LQ QL    L L         +V + KGR NYLCL  L   +       + 
Sbjct: 253 VWISTYTKALQRQLDRESLRLFPDPATAARRVVVRKGRENYLCLLNLEDALQGGFAGRA- 311

Query: 127 PTLLTQLVKVRSWASSTQSGDLGECDDLAEDSPII------PTITSTNDNCLGKECASYQ 180
             +L QLV    WA+ ++ GD+    DL    PI+        +T     C+   C  Y+
Sbjct: 312 -AILAQLVA--RWAAFSKDGDMVG-GDLPGWLPILFRRNGSTALTDRRGECIYAGCPHYR 367

Query: 181 DCFVSKARRRAMDADVVVVNHHLFLADLAI-KETGFGELIPEAEVFIFDEAHQLPDIASQ 239
            CF+ ++ R + +AD+V+ NH L + + A  +ETG        +  +FDE H L D A  
Sbjct: 368 KCFIERSARASAEADIVIANHALVMINAARGRETG-----QRPQRIVFDEGHHLFDAADS 422

Query: 240 YFGQSVSSRQVQDLAKDI----------ELGYRTEAKDMRQLQKVSDKLVQAAMDL---- 285
            F  ++S ++  +L + +            G      D+    +   + ++ A++     
Sbjct: 423 TFSVALSGQEAIELRRWVMGPEGGSRGRRRGLAARLSDLASYDEEGGEAIRTAVEAARAL 482

Query: 286 -------RIVLGEP 292
                  RIV GEP
Sbjct: 483 PADDWLKRIVAGEP 496



 Score = 67.4 bits (163), Expect = 3e-15
 Identities = 70/233 (30%), Positives = 110/233 (47%), Gaps = 25/233 (10%)

Query: 396 IFTSATLAVNEDFSHFTERLGLT----PSAQFSLVSPFDYQQQAVLCVPRYLPEPNSSGL 451
           I TSATL    D+S+   R G+T     + +F   SPFDY  +A + +   +   + + +
Sbjct: 655 IVTSATLKGGGDWSNAEARSGVTHLSHSAERFEAASPFDYPGRAEVLIVTDIKRGDIAAM 714

Query: 452 AEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERFRERLT---LPVLMQG-ETSKQKTL 507
           +    R+    IE + G    L T+   +R +  R  +RL    LP+  Q  +     TL
Sbjct: 715 SGAYARL----IEASGGGTLGLFTAIRRLRAVHARIADRLARAGLPLYAQHVDPMDTGTL 770

Query: 508 AE-FMELGNALLVATGAFWEGIDVRGDTLSCVIIDKLPFTAPDDPLLKARIEDCRLRGGD 566
            + F +   A L+ T A  +G+DV G +L  V+++ +P++ P   L  AR    RL GG 
Sbjct: 771 VDIFRDDPRASLLGTDALRDGVDVPGHSLRLVVMEGVPWSKPT-VLHAAR----RLAGGG 825

Query: 567 PFAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLVTRDYGGVFLASLPP 619
                +L  A   L Q  GRLIR   DKG+ +I    + +R      L++ PP
Sbjct: 826 SAYDDRLIRA--RLAQAFGRLIRRAEDKGSFVILSAAMPSR-----LLSAFPP 871