Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., DinG family ATP-dependent helicase YoaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  396 bits (1017), Expect = e-114
 Identities = 259/675 (38%), Positives = 365/675 (54%), Gaps = 38/675 (5%)

Query: 2   IEKTFSQQGALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPAL 61
           +   F+  G L +A    +PRQ Q+DMA AVA AI N   L VEAGTG GKTFAYLVP L
Sbjct: 8   VAAAFAADGPLARAHGHLRPRQGQLDMAAAVARAIENGHGLAVEAGTGVGKTFAYLVPLL 67

Query: 62  LSGKKVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESH 121
           LSG++ ++ST ++ LQ+QLF RD+P +V ALG   +VALLKGR++Y+CL RL + +   H
Sbjct: 68  LSGRRALLSTATQALQDQLFARDIPAVVRALGLPVRVALLKGRSSYVCLHRLEQAL---H 124

Query: 122 TPES----DPTLLTQLVKVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECA 177
            P S    DP +   L +V  WA  ++SGDL E + L E SP+ P ITST DNCLG  C 
Sbjct: 125 GPASAGPRDPAISAGLTQVLHWAHRSRSGDLAELEALDERSPLRPLITSTRDNCLGASCP 184

Query: 178 SYQDCFVSKARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIA 237
            + +C V++AR  A+ A+ VV+NHHLF +D  + ETG   L+P A+V +FDEAHQL D  
Sbjct: 185 RHGECHVNRARGEALQAEWVVINHHLFFSDQLLLETGVASLLPAADVVVFDEAHQLNDTG 244

Query: 238 SQYFGQSVSSRQVQDLAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIV---LGEPGY 294
             + G+++ + Q+++LA+D+       A+  R    ++  + QA+  +  +       G 
Sbjct: 245 IPFLGRTLGAGQLRELARDLATQGAQWARGQRPWAHLALAIEQASRAMAALPRQASASGG 304

Query: 295 RGNWREVLK--VPTVA--REVERLNEALQFALDVLKLALGRSQLLDTAFERATLILGRIR 350
           R  W       V T+A  R +  L +AL  AL     AL  +       ER  + +  ++
Sbjct: 305 RHRWHGAAPEGVDTLAWQRGIANLGQALAAAL----AALTATAQAAAELERLRVRVQALQ 360

Query: 351 RVCDVSVTGYS--------YWYD-TTPRHFSLHITPLSVADKFREQIALKEG--AWIFTS 399
            V D    G S         W +    RH+ +   P   +  F+  +    G  +W+F+S
Sbjct: 361 TVWDDMGFGPSAAQASEMVRWVEWGEGRHWRIVCAPPDSSRLFQSLLDEAPGRRSWVFSS 420

Query: 400 ATLAVNEDFSHFTERLGLTPSAQFSL--VSPFDYQQQAVLCVPRYLPEPNSSGLAEKLVR 457
           ATL  + + S FT  LGL      +L   SPFD+  QA L VP  LPEP  +     L  
Sbjct: 421 ATLGDDAELSWFTRGLGLDALGLQTLRVPSPFDHATQAALYVPHDLPEPADASHTPALAD 480

Query: 458 MLAPVIEHNQGRCFFLCTSHSMMRDLGERFRERLT------LPVLMQGETSKQKTLAEFM 511
            +A       GR   L T+      + E  +  +       L VL QG  SK+  LA F 
Sbjct: 481 AVARWASRLGGRTLVLTTTLKAASRMAEHLQGLVAQGRCAPLRVLAQGRLSKRALLARFR 540

Query: 512 ELGN-ALLVATGAFWEGIDVRGDTLSCVIIDKLPFTAPDDPLLKARIEDCRLRGGDPFAQ 570
           E    ++LVA+ +FWEG+D+ GD L  ++IDKLPF  PDDPL++AR +    +G   F  
Sbjct: 541 EGSEPSVLVASASFWEGVDLAGDALQLLVIDKLPFAPPDDPLMQARGQRLEAQGLSAFND 600

Query: 571 VQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLVTRDYGGVFLASLPPIPRTRDLDVVT 630
             LPEA + LKQG GRLIR + D+G L+I D RL+TR YG   L +LP + R  D   + 
Sbjct: 601 AFLPEAAMALKQGAGRLIRAETDQGILVIGDRRLITRSYGNRLLEALPAMRRLVDETDME 660

Query: 631 TFLQQLAITEINQRD 645
             L  L +T  + +D
Sbjct: 661 AGLDALVLTRSSTKD 675