Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 920 a.a., ATP-dependent DNA helicase from Magnetospirillum magneticum AMB-1

 Score =  123 bits (309), Expect = 3e-32
 Identities = 187/720 (25%), Positives = 287/720 (39%), Gaps = 133/720 (18%)

Query: 2   IEKTFSQQGALGQAIPGFQPRQAQVDMAKAVASAIA-----NQSQLVV-EAGTGTGKTFA 55
           ++ T ++Q        G + R  Q D A AV+ A        Q  LV+ EAGTGTGKT  
Sbjct: 193 VDPTETRQRLAQMLGEGAEQRPTQADYASAVSRAFLPREAEGQPHLVLAEAGTGTGKTLG 252

Query: 56  YLVPALL----SGKKVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLD 111
           Y+ PA L    +G  V IST ++NLQ QL      L  +A     +V + KGR NY CL 
Sbjct: 253 YIAPAGLWAEKNGAPVWISTHTRNLQRQLDGELDRLFPNAGDKARKVVIRKGRENYACL- 311

Query: 112 RLSRQMVESHTPESDPTLLTQLVKVRSWASSTQSGDLGECDDLAEDSPIIPT-----ITS 166
            L+ + + S     D   +  + +   W  +T+ GD+   D     + ++       I  
Sbjct: 312 -LNYEEMVSRNRNQDAPAVGLMAR---WLLATRDGDMVGGDFPGWLTEVLGRARTLGIAD 367

Query: 167 TNDNCLGKECASYQDCFVSKARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFI 226
               C+   C  Y+ CF+ +A RRA  AD+VV NH L +   A+     G    +    +
Sbjct: 368 RRGECIFSACPHYRKCFIERAVRRARRADIVVANHALVMIQAALGGLDDG---AQPTRLV 424

Query: 227 FDEAHQLPDIASQYFGQSVSSRQVQDLAKDIELGYRTEA---KDMRQLQKVSDKLVQ--- 280
           FDE H + D A   F   ++  +  ++ + I LG   EA      R L + ++ LV    
Sbjct: 425 FDEGHHVFDAADAAFSAHLTGLEAAEVRRWI-LGPEGEAVSRSRARGLHRRAEDLVGGSE 483

Query: 281 ---AAMD---------------LRIVLGEP-GYRGNWREVLKVPTVAR------------ 309
              AA+D               +RI  GEP G    +  +L+    AR            
Sbjct: 484 EAIAALDGALAAARALPGPGWMVRISEGEPQGPAEAFLGLLRRQVYARAAHPDSPYSLET 543

Query: 310 EVERLNEALQFALDVLKLALGR------------SQLL-DTAFERATLILGRIRRVC--- 353
           E     E L  A   L  ALGR            S LL D A E  +    RI  +C   
Sbjct: 544 ETTAPLEGLPEAAGALAAALGRIALPLQVLSKSLSALLDDEAAELESATRSRIEGICRSI 603

Query: 354 ---------------DVSVTG-------YSYWY-----DTTPRHFSLHITPLSVADKFRE 386
                          D  V G       Y  W+     D       +H   +     F +
Sbjct: 604 ERRVLMPLAGWKGMLDGVVQGGGVVERQYIDWFSVDRIDGRDYDAGMHRHWIDPTRPFAK 663

Query: 387 QIALKEGAWIFTSATLA-----VNEDFSHFTERLGL----TPSAQFSLVSPFDY--QQQA 435
            +       + TSATL      V  D+     R G     +   +  + SPFDY  + + 
Sbjct: 664 AVVEPAHGVVITSATLKDGSGDVETDWRAAERRTGALHLDSDPLRAEVASPFDYPTRTKV 723

Query: 436 VLCVPRYLPEPNSSGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERFR---ERLT 492
           ++       + +  G A + + + A       G    L T+ S ++ + +R     E   
Sbjct: 724 LIVTDVRKDDMDQVGAAYRELFLAA------NGGALGLFTAISRLKAVHKRISAPLEDAG 777

Query: 493 LPVLMQG-ETSKQKTLAE-FMELGNALLVATGAFWEGIDVRGDTLSCVIIDKLPFTAPDD 550
           LP+L Q  +     TL + F    ++ L+ T A  +G+DV G +L  ++ D++P+  P D
Sbjct: 778 LPLLAQHLDNMDTSTLVDIFRAEEHSCLLGTDAVRDGVDVPGRSLHLIVFDRVPWPRP-D 836

Query: 551 PLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLVTRDYG 610
            L KAR  +   R  D           + LKQ  GRL+R  +D+G  ++ D  + +R +G
Sbjct: 837 ILHKARRAEFGGRAYDDMI------TRLRLKQAFGRLVRRADDRGVFVLLDPMMPSRLFG 890