Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., DinG family ATP-dependent helicase YoaA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  810 bits (2091), Expect = 0.0
 Identities = 399/628 (63%), Positives = 487/628 (77%), Gaps = 2/628 (0%)

Query: 6   FSQQGALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPALLSGK 65
           F+  G L +AI GF+PR+ Q  MA AV  AI N   LVVEAGTGTGKT+AYL PAL +GK
Sbjct: 5   FAADGQLAKAITGFKPREPQRQMAVAVTQAIENAQPLVVEAGTGTGKTYAYLAPALRAGK 64

Query: 66  KVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESHTPES 125
           KVIISTGSK LQ+QL+ RDLP +  AL F G+ ALLKGR+NYLCL+RL +Q +     + 
Sbjct: 65  KVIISTGSKALQDQLYSRDLPTVAKALAFTGKTALLKGRSNYLCLERLEQQALAGG--DL 122

Query: 126 DPTLLTQLVKVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECASYQDCFVS 185
               L+ ++ +RSW++ T+ GD+  C  +AEDS   P +TSTNDNCLG +C  Y++CFV 
Sbjct: 123 PVQTLSDVILLRSWSNQTRDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPLYKECFVV 182

Query: 186 KARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIASQYFGQSV 245
           KAR++AMDADVV+VNHHLFLAD+ +KE+GFGELIP+AEV IFDEAHQLPDIASQYFGQS+
Sbjct: 183 KARKKAMDADVVIVNHHLFLADMVVKESGFGELIPQAEVMIFDEAHQLPDIASQYFGQSL 242

Query: 246 SSRQVQDLAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIVLGEPGYRGNWREVLKVP 305
           SSRQ+ DLAKDI + YRTE KD +QLQK +D+L Q+A D R+ LGEPGYRGN RE+L   
Sbjct: 243 SSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLADS 302

Query: 306 TVAREVERLNEALQFALDVLKLALGRSQLLDTAFERATLILGRIRRVCDVSVTGYSYWYD 365
            + R    L++ L+   DV KL+LGRS LLD AFERATL   R++R+ +++  GYSYWY+
Sbjct: 303 RIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRSRLKRLKEINQPGYSYWYE 362

Query: 366 TTPRHFSLHITPLSVADKFREQIALKEGAWIFTSATLAVNEDFSHFTERLGLTPSAQFSL 425
            T RHF+L +TPL+VADKF+E +  K G+WIFTSATL+VN+D  HFT RLG+  +    L
Sbjct: 363 CTSRHFTLALTPLTVADKFKEVMEQKPGSWIFTSATLSVNDDLHHFTARLGIEQAESMLL 422

Query: 426 VSPFDYQQQAVLCVPRYLPEPNSSGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGE 485
            SPFDY +QA+LCVPR LP+ N  G A +L  ML P+IE N GRCF LCTSH+MMRDL E
Sbjct: 423 PSPFDYTRQALLCVPRNLPQTNQPGAARQLAAMLRPIIEANNGRCFMLCTSHAMMRDLAE 482

Query: 486 RFRERLTLPVLMQGETSKQKTLAEFMELGNALLVATGAFWEGIDVRGDTLSCVIIDKLPF 545
           +FR  +TLPVL+QGETSK + L +F+  GNALLVAT +FWEG+DVRGDTLS VIIDKLPF
Sbjct: 483 QFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPF 542

Query: 546 TAPDDPLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLV 605
           T+PDDPLLKAR+EDCRLRGGDPF +VQLP+AVITLKQGVGRLIRD +D+G L+ICDNRLV
Sbjct: 543 TSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLV 602

Query: 606 TRDYGGVFLASLPPIPRTRDLDVVTTFL 633
            R YG  FLASLPP PRTRD+     FL
Sbjct: 603 MRPYGATFLASLPPAPRTRDIARAVRFL 630