Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 716 a.a., ATP-dependent DNA helicase (NCBI) from Escherichia coli BW25113

 Score =  162 bits (411), Expect = 4e-44
 Identities = 178/684 (26%), Positives = 284/684 (41%), Gaps = 82/684 (11%)

Query: 11  ALGQAIPGFQPRQAQVDMAKAVASAIANQS--QLVVEAGTGTGKTFAYLVPALLSG---- 64
           AL + IP F PR  Q  M   VA  +A +    L +EA TG GKT +YL+P +       
Sbjct: 17  ALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQ 76

Query: 65  KKVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESHTPE 124
           K +++ST +  LQ+Q++ +DLPL+   +      A   GR  Y+C   L+       T +
Sbjct: 77  KTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAF-GRGRYVCPRNLTALASTEPTQQ 135

Query: 125 SDPTLLT------------QLVKVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNCL 172
                L             +  K++    + +   L +  D+A D  +   +++   +CL
Sbjct: 136 DLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCL 195

Query: 173 GKECASYQDCFVSKARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAE--VFIFDEA 230
            + C  Y++C    ARR   +A+VVV NH L +A +  +      ++P+ +  + + DE 
Sbjct: 196 NRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESE-----AVLPDPKNLLLVLDEG 250

Query: 231 HQLPDIASQYFGQSVSSRQVQDLAKDIELGYRTEAKDMRQ--------------LQKVSD 276
           H LPD+A      S +          ++L  +  A  M Q              L    +
Sbjct: 251 HHLPDVARDALEMS-AEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCE 309

Query: 277 KLVQAAMDLRIVLG---EPGYRGNWR--------EVLKV-PTVAREVERLNEALQFALDV 324
           +L +    L  +L      G     R        EVL++   +A+  E L    +  L+ 
Sbjct: 310 ELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLAELFLND 369

Query: 325 LKLALG-----RSQLLDTAFERATLI------LGRIRRVCDVSVTGYSYWYDTTPRHFSL 373
           L    G     R   L     RA  +      L R+  +   S    + W     R   L
Sbjct: 370 LSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQL 429

Query: 374 HI----TPLSVADKFREQIALKEGAWIFTSATLAVNEDFSHFTERLGLTPSAQ---FSLV 426
           H+      + V+D+    +       I TSATL     FS   E  GL   A     +L 
Sbjct: 430 HLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALD 489

Query: 427 SPFDYQQQAVLCVPRYLPEPNSSGLAEKLVRMLA---PVIEHNQ--GRCFFLCTSHSMMR 481
           SPF++ +Q  + +PR   EP+     + +  M A     +E  +  G      +  +M R
Sbjct: 490 SPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQR 549

Query: 482 DLGERFRERLTLPVLMQGETSKQKTL----AEFMELGNALLVATGAFWEGIDVRGDTLSC 537
            L   +   L L +L+QG+  + + +            ++LV   +F EG+D++GD LS 
Sbjct: 550 FLD--YVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQ 607

Query: 538 VIIDKLPFTAPDDPLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGAL 597
           V I K+ F   D P++    E  +     PF    LP A   L Q VGRLIR     G +
Sbjct: 608 VHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEV 667

Query: 598 IICDNRLVTRDYGGVFLASLPPIP 621
           +I D RL+T++YG   L +LP  P
Sbjct: 668 VIYDKRLLTKNYGKRLLDALPVFP 691