Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., Rad3-related DNA helicases from Enterobacter asburiae PDN3

 Score =  823 bits (2125), Expect = 0.0
 Identities = 407/628 (64%), Positives = 492/628 (78%), Gaps = 2/628 (0%)

Query: 6   FSQQGALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPALLSGK 65
           FS +G L QAIPGF+PR+ Q  MA AVA AI     LVVEAGTGTGKT+AYL PAL + K
Sbjct: 5   FSPEGQLAQAIPGFKPREPQRQMAHAVARAIDKAQPLVVEAGTGTGKTYAYLAPALRAKK 64

Query: 66  KVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESHTPES 125
           KVIISTGSK LQ+QL+ RDLP +  AL + G++ALLKGR+NYLCL+RL +Q +     + 
Sbjct: 65  KVIISTGSKALQDQLYSRDLPTVAKALKYKGRLALLKGRSNYLCLERLEQQALAGG--DL 122

Query: 126 DPTLLTQLVKVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECASYQDCFVS 185
               L+ ++ +RSWA+ T+ GD+  C  + EDSP  P +TSTNDNCLG +C  Y+DCFV 
Sbjct: 123 PVQTLSDVIILRSWANQTEEGDISTCASVPEDSPAWPLVTSTNDNCLGSDCPLYKDCFVV 182

Query: 186 KARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIASQYFGQSV 245
           KAR+ AMDADVVVVNHHLFLAD+ +K++GFGELIPEA+V IFDEAHQLPDIASQYFGQS+
Sbjct: 183 KARKTAMDADVVVVNHHLFLADMVVKDSGFGELIPEADVMIFDEAHQLPDIASQYFGQSL 242

Query: 246 SSRQVQDLAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIVLGEPGYRGNWREVLKVP 305
           SSRQ+QDLAKD  + YRTE KD +QLQK +D+L Q+A D R+ LGEPGYRGN RE+L   
Sbjct: 243 SSRQLQDLAKDFTIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLADK 302

Query: 306 TVAREVERLNEALQFALDVLKLALGRSQLLDTAFERATLILGRIRRVCDVSVTGYSYWYD 365
            + R +  L++AL+   DV KL+LGRS LLD AFERATL  GR++R+ +++  G+SYWY+
Sbjct: 303 NIQRALLLLDDALELCYDVAKLSLGRSALLDAAFERATLYRGRLKRLKEINQPGFSYWYE 362

Query: 366 TTPRHFSLHITPLSVADKFREQIALKEGAWIFTSATLAVNEDFSHFTERLGLTPSAQFSL 425
            T RHF+L +TPL+VADKF+E +A K G+WIFTSATL+VN+D  HFTERLG+  +    L
Sbjct: 363 CTSRHFTLALTPLTVADKFKEVMAQKPGSWIFTSATLSVNDDLHHFTERLGIEEAESLLL 422

Query: 426 VSPFDYQQQAVLCVPRYLPEPNSSGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGE 485
            SPFDY++QA+LCVPR LP PN  G A  L  ML P+IE N GRCF LCTSHSMMRDL E
Sbjct: 423 PSPFDYEKQALLCVPRNLPLPNQPGAARHLAAMLKPMIEANNGRCFMLCTSHSMMRDLAE 482

Query: 486 RFRERLTLPVLMQGETSKQKTLAEFMELGNALLVATGAFWEGIDVRGDTLSCVIIDKLPF 545
           +FR  +TLPVL+QGETSK + L +F+  GNALLVAT +FWEG+DVRGDTLS VIIDKLPF
Sbjct: 483 QFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPF 542

Query: 546 TAPDDPLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLV 605
           T+PDDPLLKAR+EDCRLRGGDPF +VQLP+AVITLKQGVGRLIRD  D+G L+ICDNRLV
Sbjct: 543 TSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDVTDRGVLVICDNRLV 602

Query: 606 TRDYGGVFLASLPPIPRTRDLDVVTTFL 633
            R YG  FLASLPP PRTRD+     FL
Sbjct: 603 MRPYGATFLASLPPAPRTRDIKRAVRFL 630