Pairwise Alignments

Query, 646 a.a., ATP-dependent DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative ATP-dependent helicase, DinG family from Escherichia coli BL21

 Score =  813 bits (2101), Expect = 0.0
 Identities = 403/628 (64%), Positives = 488/628 (77%), Gaps = 2/628 (0%)

Query: 6   FSQQGALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPALLSGK 65
           F+  G L +AIPGF+PR+ Q  MA AV  AI     LVVEAGTGTGKT+AYL PAL + K
Sbjct: 5   FAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPALRAKK 64

Query: 66  KVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVESHTPES 125
           KVIISTGSK LQ+QL+ RDLP +  AL + G VALLKGR+NYLCL+RL +Q +     + 
Sbjct: 65  KVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGG--DL 122

Query: 126 DPTLLTQLVKVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECASYQDCFVS 185
              +L+ ++ +RSW++ T  GD+  C  +AEDS   P +TSTNDNCLG +C  Y+DCFV 
Sbjct: 123 PVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPMYKDCFVV 182

Query: 186 KARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIASQYFGQSV 245
           KAR++AMDADVVVVNHHLFLAD+ +KE+GFGELIPEA+V IFDEAHQLPDIASQYFGQS+
Sbjct: 183 KARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQSL 242

Query: 246 SSRQVQDLAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIVLGEPGYRGNWREVLKVP 305
           SSRQ+ DLAKDI + YRTE KD +QLQK +D+L Q+A D R+ LGEPGYRGN RE+L  P
Sbjct: 243 SSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLANP 302

Query: 306 TVAREVERLNEALQFALDVLKLALGRSQLLDTAFERATLILGRIRRVCDVSVTGYSYWYD 365
            + R    L++ L+   DV KL+LGRS LLD AFERATL   R++R+ +++  GYSYWY+
Sbjct: 303 QIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYSYWYE 362

Query: 366 TTPRHFSLHITPLSVADKFREQIALKEGAWIFTSATLAVNEDFSHFTERLGLTPSAQFSL 425
            T RHF+L +TPLSVADKF+E +A K G+WIFTSATL+VN+D  HFT RLG+  +    L
Sbjct: 363 CTSRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGIEQAESLLL 422

Query: 426 VSPFDYQQQAVLCVPRYLPEPNSSGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGE 485
            SPFDY +QA+LCVPR LP+ N  G A +L  ML P+IE N GRCF LCTSH+MMRDL E
Sbjct: 423 PSPFDYSRQALLCVPRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDLAE 482

Query: 486 RFRERLTLPVLMQGETSKQKTLAEFMELGNALLVATGAFWEGIDVRGDTLSCVIIDKLPF 545
           +FR  +TLPVL+QGETSK + L +F+  GNALLVAT +FWEG+DVRGDTLS VIIDKLPF
Sbjct: 483 QFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPF 542

Query: 546 TAPDDPLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIICDNRLV 605
           T+PDDPLLKAR+EDCRLRGGDPF +VQLP+AVITLKQGVGRLIRD +D+G L+ICDNRLV
Sbjct: 543 TSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLV 602

Query: 606 TRDYGGVFLASLPPIPRTRDLDVVTTFL 633
            R YG  FLASLPP PRTRD+     FL
Sbjct: 603 MRPYGATFLASLPPAPRTRDIARAVRFL 630