Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., AMP-binding protein from Rhodanobacter sp000427505 FW510-R12

 Score =  218 bits (556), Expect = 4e-61
 Identities = 160/524 (30%), Positives = 247/524 (47%), Gaps = 23/524 (4%)

Query: 46  GAVMTFRKLEERSRAFAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVN 105
           G  +++R+        AA L   L L +GDRV +  PN  ++ +  F   +AG++ VN+N
Sbjct: 44  GVRLSYREFHAEVERVAAGLLA-LGLVRGDRVGIWSPNRAEWVLLQFAAPKAGLVLVNIN 102

Query: 106 PLYTPRELEHQLNDADARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVD 165
           P Y   ELE+ LN     A+V+  +F  +    +       + +++ GQ+      T+ +
Sbjct: 103 PAYRLHELEYSLNKVGCCALVLPRHFKTSHYLDILAELAPELAVSAPGQLRSARLPTLRE 162

Query: 166 FVVKYVKGMVPKYDLPGAISMRKALHKG-----RRLQYVKPFMSGEDIAFLQYTGGTTGV 220
            +V      +     PG    R+   +G       L   +  +  +D   +Q+T GTTG 
Sbjct: 163 VIV------LDDEPAPGTRRWRELAERGDAAALAHLHAAEHELGFDDPVNIQFTSGTTGA 216

Query: 221 AKGAILTHRNMVANVLQAKGAYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNL 280
            KGA LTH N+V N      A    L E   L +  +P YH F + +  L  +  G   +
Sbjct: 217 PKGATLTHHNIVNNGWFIGEAMR--LTEHDRLCIP-VPFYHCFGMVLGNLACVTHGACMV 273

Query: 281 LITNPRDIPGFVKELQKYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRA 340
           +     D    ++ +     T + GV T+F A + +  F E D   ++  +  G      
Sbjct: 274 IPGEGFDALATLETVAAEKCTGLHGVPTMFIAELEHPRFAEFDLSTLRTGIMAGSPCPIE 333

Query: 341 VAERWKKTTGVHLLE---GYGLTECSPLVTGNPYD--LTDYTGAIGLPVPSTEVRIVDDA 395
           V  R      +HL E    YG+TE SP+      D  L     ++G   P  EV++VD+ 
Sbjct: 334 VMRR--VVDEMHLGEITIAYGMTETSPVSFQTVPDDPLERRVDSVGRVHPQLEVKLVDER 391

Query: 396 GNVVPNDQVGELQVRGPQVMQGYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRK 455
           G +VP   +GEL  RG  VM GYW+  E T+EV++   W+ TGD+   DD G   IV R 
Sbjct: 392 GRIVPRGTLGELCTRGYSVMLGYWEDTERTREVIDEARWMHTGDLATLDDDGYCRIVGRL 451

Query: 456 KDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQANDVSGELVKIYVVKRDPS-LTKDEV 514
           KDMI+  G N+ P EIE+ +  + KVL+V   G  +   GE V  ++  R+ S  +  E+
Sbjct: 452 KDMIIRGGENISPREIEEFLYTYPKVLDVQVFGVPDAKFGEQVCAWIRLREGSEASVAEI 511

Query: 515 IAHCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRVLREENDAQL 558
             +C  HL  YKVP  V F D  P T  GK+ + ++RE   A+L
Sbjct: 512 QDYCCHHLAYYKVPHYVRFVDAFPMTVTGKVQKYLMREAMVAEL 555