Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score =  283 bits (724), Expect = 1e-80
 Identities = 187/541 (34%), Positives = 294/541 (54%), Gaps = 15/541 (2%)

Query: 27  EMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAYLQNDLKLKKGDRVALMMPNLLQ 86
           E+ E SV  +  +PA   +G   T+ ++       AA LQ  + + KG  V L +PN   
Sbjct: 17  ELLEASVAAHGAKPALSFLGRKWTYAEVGAAVNKVAAGLQA-MGVGKGTHVGLCLPNTPY 75

Query: 87  YPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIVSNFANTLEQIVA---NTQ 143
             +  F V++AG   VN +PLY  REL HQ+ D+    I++V +      ++VA      
Sbjct: 76  SVIFFFAVMKAGGTVVNFSPLYVERELRHQIRDSGT-TIMVVPDLKLIHSRVVAVAHEAG 134

Query: 144 VKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAISMRKALHKGRRLQYVKPFM 203
           +K +V+  +  +LP  KG + +   +  K +    D    +     L  G R + V+   
Sbjct: 135 LKSIVVCPMSGILPFPKGLLFNLFKRKEKAVYSTGD-GMHVDYASLLKYGDRPEPVE-VD 192

Query: 204 SGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGPVLQEGRELVVTALPLYHVF 263
             +D+A LQYTGGTTGV KGA+LTH N+ AN  Q    +    + G + V+  LPL+HVF
Sbjct: 193 PAKDLAVLQYTGGTTGVPKGAMLTHANVSANARQLV-QHAECERIGVKRVLGVLPLFHVF 251

Query: 264 ALTVNCLLFIEMGGRNLLITNPR-DIPGFVKELQKYPFTAITGVNTLFNALVNNEDFHEL 322
           A+    L+ I +G   +L+  PR ++   + ++++   T   GV T++ A+ N     + 
Sbjct: 252 AMQTVMLIPICLGAEIILV--PRFNLMSLLDDIEREKPTMFPGVPTIYAAINNVGGIEKR 309

Query: 323 DFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTECSPLVTGNPYDLTDYTGAIGL 382
           D  ++ L++ GG  +   V  R+++ TG  L+EGYGL+E SP+V+ NP       G++G 
Sbjct: 310 DLSSLTLSISGGAPLPLDVRTRFQELTGCPLVEGYGLSESSPVVSANPPLGLVKDGSVGT 369

Query: 383 PVPST--EVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEATKEVLNAEGWLSTGDI 440
            +P T  E+R + D+  ++P  Q GE+ VRGPQVM GYW RP+ T  V   +G L TGD+
Sbjct: 370 ALPETVIEIRDLADSTRLMPVGQKGEVCVRGPQVMAGYWNRPDETTAVF-VDGALRTGDV 428

Query: 441 VKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQANDVSGELVKI 500
              D+ G + +VDR KD+IL  G+NVYP  IE+ + LH  V E  AIG  +   G+  K 
Sbjct: 429 GLLDEDGYLFLVDRIKDVILCGGYNVYPRMIEEALYLHPAVAEAVAIGIPDSYRGQAPKA 488

Query: 501 YV-VKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRVLREENDAQLA 559
           +V +++D   T  E++      ++  ++PK +E RD LPK+ VGK+ ++ L EE   + A
Sbjct: 489 FVTLRKDAQATPAELMEFLSAQISKIEMPKAIEIRDSLPKSVVGKLSKKELVEEERQRAA 548

Query: 560 A 560
           A
Sbjct: 549 A 549