Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas simiae WCS417

 Score =  596 bits (1537), Expect = e-175
 Identities = 296/558 (53%), Positives = 392/558 (70%), Gaps = 2/558 (0%)

Query: 5   WLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAY 64
           W  +YP  +   INPD+YP++  + +QS  ++A++PAF N+G  +T+ +L E S AFAAY
Sbjct: 6   WKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSGAFAAY 65

Query: 65  LQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARA 124
           LQ    LK GDR+A+ +PN+LQYPVA+FG +RAG+I VN NPLYT RE+EHQ ND+ A+A
Sbjct: 66  LQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125

Query: 125 IVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAI 184
           +V ++N A+  E++V  T VKHV++T +  +LP  K  +++ V+KYVK MVP Y LP AI
Sbjct: 126 LVCLANMAHLAEKVVPKTAVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYHLPNAI 185

Query: 185 SMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGP 244
                L KG          +  D+A LQYTGGTTGVAKGA+LTHRN+VAN+LQ K   G 
Sbjct: 186 KFNDVLAKGHGQPVSDASPTSSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCKALMGS 245

Query: 245 VLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFTAIT 304
            L EG E+++T LPLYH++A T +C+  + +G  N+LI+NPRD+P  VKEL K+ F+   
Sbjct: 246 NLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWKFSGFV 305

Query: 305 GVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTECSP 364
           G+NTLF AL NNE F +LDF  +K+ + GGMA+Q A AERWK  TG  + EGYG+TE SP
Sbjct: 306 GLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCGICEGYGMTETSP 365

Query: 365 LVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEA 424
           + T NP       G IG+PVPST  +++ D G  +   + GEL V+GPQVM+GYWQR +A
Sbjct: 366 VATVNPIQHIQ-IGTIGIPVPSTVCKVIADDGTELALGETGELCVKGPQVMKGYWQRQDA 424

Query: 425 TKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEV 484
           T E+L++EGWL TGDI      G + IVDRKKDMILVSGFNVYPNE+EDV+A    VL+ 
Sbjct: 425 TDEMLDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPGVLQC 484

Query: 485 AAIGQANDVSGELVKIY-VVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVG 543
           AAIG  ++ SGE +K++ VVK   +LTK++V+ H R ++T YKVPK VEFRD LP TNVG
Sbjct: 485 AAIGVPDEKSGEHIKLFIVVKPGATLTKEQVMEHMRANVTAYKVPKAVEFRDALPTTNVG 544

Query: 544 KILRRVLREENDAQLAAK 561
           KILRR LR+E   +L  K
Sbjct: 545 KILRRELRDEELKKLGLK 562