Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., long-chain fatty acid--CoA ligase from Pseudomonas simiae WCS417

 Score =  594 bits (1532), Expect = e-174
 Identities = 300/559 (53%), Positives = 408/559 (72%), Gaps = 10/559 (1%)

Query: 2   DKPWLSRYPKDVPETINP--DQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSR 59
           ++ WL+ Y   VP  I+   + YPSL E+F + + K+ ++ A++++G  MT+   + +  
Sbjct: 10  ERIWLNAYLPGVPADIDAGIEDYPSLREVFLEHLEKFRERVAYVSIGTEMTYADWQVQGV 69

Query: 60  AFAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLND 119
           AFAA+LQ    ++KG+RVALMMPN LQYP+ L G + AG + VNVNPLYT  EL+H L D
Sbjct: 70  AFAAWLQGQ-GVRKGERVALMMPNCLQYPICLLGTILAGAVVVNVNPLYTSHELKHLLKD 128

Query: 120 ADARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYD 179
           + A  +VI  NFA+TLE+++  + VK VV+ ++G +L   KG  ++F+++ V+  VP ++
Sbjct: 129 SGAETVVIFENFAHTLEKVITGSSVKRVVIAAIGDLLGTFKGAAMNFILRRVQKQVPAFN 188

Query: 180 LPGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAK 239
           LPG++   + L +GR L +    M  + +AFLQYTGGTTG AKG +L+HRN++AN+LQAK
Sbjct: 189 LPGSVRFNQVLKQGRALNHFPVEMHLDALAFLQYTGGTTGDAKGVMLSHRNIIANLLQAK 248

Query: 240 GAYGPVL-QEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKY 298
              G  L Q+ +E  VT LPLYH+F+LTVNCL+F+ +GGRN+LI NPRD+      L+K 
Sbjct: 249 AWVGDQLDQDKQETNVTLLPLYHIFSLTVNCLMFMCLGGRNILIANPRDVKRVQMILRKE 308

Query: 299 PFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYG 358
            F  I GVNTLFN L+ NE F   DF ++++ + GGMA   AVA+RWK+ TG+ ++EGYG
Sbjct: 309 RFNGIAGVNTLFNGLLENEAFCARDFSDLRMVIAGGMATHTAVAKRWKEVTGLPIIEGYG 368

Query: 359 LTECSPLVTGNPYDLT-----DYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQ 413
           LTECSP+V+ +P D+      ++TG+IG+P+PST VR V + G +    + GELQVRGPQ
Sbjct: 369 LTECSPVVSISPIDIARMREMEFTGSIGVPLPSTWVRFVREDGELAEIGEQGELQVRGPQ 428

Query: 414 VMQGYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIED 473
           VMQGYWQRPEAT EVL+AEGWLSTGDI   D +G I +VDRKKDMILVSGFNVYPNEIED
Sbjct: 429 VMQGYWQRPEATAEVLDAEGWLSTGDIGVMDARGYIRLVDRKKDMILVSGFNVYPNEIED 488

Query: 474 VVALHGKVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEF 533
           VVALH  V EVAAIG  + V+GE VKI VV++DP+LT+++++AHCR++LTGYK+PK VEF
Sbjct: 489 VVALHPAVAEVAAIGVEDGVTGEKVKIIVVRKDPNLTQEQILAHCREYLTGYKMPKYVEF 548

Query: 534 R-DDLPKTNVGKILRRVLR 551
           R  +LPKT VGK+LRR LR
Sbjct: 549 RTTELPKTTVGKVLRRALR 567