Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  250 bits (639), Expect = 9e-71
 Identities = 173/566 (30%), Positives = 286/566 (50%), Gaps = 24/566 (4%)

Query: 3   KPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFA 62
           +P    +PK +P +I      SL      S  +Y D+PA +  G V+++R   E++   A
Sbjct: 4   RPHYKFWPKRLPHSITVPA-TSLWHNLATSAARYPDKPALVFFGRVLSYRDFAEQAERLA 62

Query: 63  AYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADA 122
             L + L +K+GDRV L M N  Q  +A F +LRA  + V VNP+    EL+H + D DA
Sbjct: 63  GAL-HALGVKRGDRVILDMQNCPQLVIAHFAILRANAVVVPVNPMNRAEELKHYITDPDA 121

Query: 123 RAIVIVSNFANTL----EQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKY 178
           +  +I  + A  L    + +    ++ H+++T                   + + +  ++
Sbjct: 122 KVAIITGDLAAELAKASDALPPEQRLSHMIVTQFTDAFDADVSGDDAPAPAWKEWLTTRH 181

Query: 179 DLPG-AISMRKALHKGRRLQYVKP--FMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANV 235
            LP  A     A        +  P   +   D+A L YT GTTG+ KG +  H +++ N 
Sbjct: 182 PLPALAGGQVMAWTDALAANHPAPAHVVGANDMALLPYTSGTTGLPKGCVHHHSSLMHNA 241

Query: 236 LQAKGAYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITN--PRDIPGFVK 293
           +  +  +G    E   +V+  +P++H+  + V+ +    +    L+I     RD+ G  +
Sbjct: 242 MAGQ-LWGGSTSEA--VVLAVVPMFHITGV-VSMMHTAVLAAATLIIMPRWDRDVAG--R 295

Query: 294 ELQKYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHL 353
            + ++  TA T + T+   L+ + +F   D  +M    GGG A+ +AVA+R  +  G+  
Sbjct: 296 LISRWKVTAWTNIPTMVIDLMASPNFASYDLSSMNYIGGGGAAMPQAVAQRLLEQYGLKY 355

Query: 354 LEGYGLTECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVD-DAGNVVPNDQVGELQVRGP 412
            EGYGLTE +     NP D       +G+P  ST+ R+VD D    +P  + GE+ + GP
Sbjct: 356 QEGYGLTETAAPSHTNPSDHPKQQ-CLGIPFMSTDARVVDPDTLAEMPIGESGEIIIHGP 414

Query: 413 QVMQGYWQRPEATKEVL---NAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPN 469
           +V QGYW+RP+AT         + +  +GD+ + D++G   I DR K MI  SGF V+P 
Sbjct: 415 EVFQGYWKRPDATAAAFVEFEGKRFFRSGDMGRMDEEGYFFITDRLKRMINASGFKVWPA 474

Query: 470 EIEDVVALHGKVLEVAAIGQANDVSGELVKIYVVKR--DPSLTKDEVIAHCRKHLTGYKV 527
           E+E ++  H  + E   I   +D  GE VK  VV R      T+ E+I  CR+++  YK+
Sbjct: 475 EVELLMFRHPAIQEACVISTKDDYRGESVKAVVVLRATHKDTTEQEIIDWCRENMAVYKI 534

Query: 528 PKLVEFRDDLPKTNVGKILRRVLREE 553
           P+ V+F D LPK+  GK++ R+L+E+
Sbjct: 535 PRKVQFVDALPKSGSGKVMWRLLQED 560