Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  235 bits (599), Expect = 4e-66
 Identities = 159/509 (31%), Positives = 255/509 (50%), Gaps = 40/509 (7%)

Query: 56  ERSRAFAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEH 115
           ER+ A  A L   L L+KG R+A+ +   ++  +     LRAG + + +N  Y   E+E+
Sbjct: 40  ERASAMIANLLEALGLEKGARIAVQVEKSVEAMLLYLATLRAGYVFLPLNTAYQSAEIEY 99

Query: 116 QLNDADARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMV 175
            + +A+   +V  S  A+ +  I      KHV      +      GT+++   +      
Sbjct: 100 FIGNAEPAVVVCTSRNASWVAPIATAAGTKHVFTLDDDRT-----GTLLEVAAQCSDRHT 154

Query: 176 PKYDLPGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANV 235
           P        + RKA                +D+A + YT GTTG +KGA+L+H N+++N 
Sbjct: 155 P--------ARRKA----------------DDMAAILYTSGTTGRSKGAMLSHGNLLSNA 190

Query: 236 LQAKGAYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKEL 295
              K  +G    EG ++++ ALP++HV  L V  L    + G  +L  +  D    V++L
Sbjct: 191 EVLKDYWG--WTEG-DVLIHALPIFHVHGLFV-ALHGALLNGSKMLWFSKFDPKRIVQKL 246

Query: 296 QKYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLE 355
            +   T   GV TL+  L+          +NM+L + G   +     E W++ TG  +LE
Sbjct: 247 PEA--TVFMGVPTLYVRLLAEPGLTREAVRNMRLFIAGSAPLLIETFEEWRERTGHTILE 304

Query: 356 GYGLTECSPLVTGNPYDLTDYT---GAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGP 412
            YG++E + ++T NPY+        G +G  +P  ++R+ DD+G     D++G ++V GP
Sbjct: 305 RYGMSETA-MLTSNPYNPAQGERRGGTVGFALPGVQLRVRDDSGRDCTTDEIGNIEVSGP 363

Query: 413 QVMQGYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIE 472
            V  GYW+ PE TKE   A+G+  TGD+ K D  G I IV R KD+I+  G+NVYP EIE
Sbjct: 364 NVFSGYWRMPEKTKEEFTADGFFKTGDVGKIDGLGYITIVGRSKDLIISGGYNVYPAEIE 423

Query: 473 DVVALHGKVLEVAAIGQANDVSGEL-VKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLV 531
             +     V E A +G  +   GE+ V I + K   SL  D ++A  +  L  +K+PK  
Sbjct: 424 GYINEMAGVAESAVVGVPHPDFGEVGVAIVIPKAGASLDADAIVADLKSKLANFKIPKRC 483

Query: 532 EFRDDLPKTNVGKILRRVLREENDAQLAA 560
               +LP+  +GK+ + +LR E+ A  AA
Sbjct: 484 FVVPELPRNTMGKVQKALLRAEHKALFAA 512