Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  223 bits (569), Expect = 1e-62
 Identities = 159/516 (30%), Positives = 250/516 (48%), Gaps = 46/516 (8%)

Query: 49  MTFRKLEERSRAFAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLY 108
           + F    +R     A L+  L ++ GDRV +M  N  ++    FG    G +   VN  +
Sbjct: 27  LDFAGFTDRVARLGAVLRQ-LGMRPGDRVGMMSLNSHRFVEYFFGTWWGGGVINPVNIRW 85

Query: 109 TPRELEHQLNDADARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVV 168
            P+E+ + L+D D R +++   FA    ++         + +SL  ++    G + + +V
Sbjct: 86  NPKEVAYSLDDCDTRILLVDDVFAPMAAELRG-------LSSSLRTVVYCGDGAVPEGMV 138

Query: 169 KY---VKGMVPKYDLPGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAI 225
            Y   +    P  D P                        +++A + YTGGTTG  KG +
Sbjct: 139 GYEALLAATDPAEDAPH---------------------DSDELAAVMYTGGTTGQPKGVM 177

Query: 226 LTHRNMVANVLQAKGAYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNP 285
           LTH ++  N L    A     Q+   +V  A P++HV    V     + +   +++    
Sbjct: 178 LTHGSLCINALGTVAALPRDTQDAAAIV--AAPMFHVAGCGVALQSLMRLVPVHVVPVF- 234

Query: 286 RDIPGFVKELQKYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERW 345
            D    ++ LQ    T +  V T+   ++ +  F E D  +++L   G   +  A+ ++ 
Sbjct: 235 -DELAVLRTLQSARITEMFLVPTMIKRVIEHPRFAEFDLSSLRLLSYGAAPIDAALLDQA 293

Query: 346 KKT-TGVHLLEGYGLTECSPLVTGNPY-------DLTDYTGAIGLPVPSTEVRIVDDAGN 397
            +   G    + YG+TE SP+VT  P        D      + G P+P  E+RIVD   N
Sbjct: 294 MRAFPGTAFAQVYGMTELSPVVTALPSHCHAPGPDRERLLRSAGTPIPIAELRIVDGDDN 353

Query: 398 VVPNDQVGELQVRGPQVMQGYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKD 457
            VP  QVGE+  RGP VM+GYW +P+ T+  L   GW+ TGD    D++G + +VDR KD
Sbjct: 354 EVPFGQVGEIVARGPMVMKGYWNKPKETEAALRG-GWMHTGDGGYMDEEGFVFVVDRMKD 412

Query: 458 MILVSGFNVYPNEIEDVVALHGKVLEVAAIGQANDVSGELVKIYVVKRD-PSLTKDEVIA 516
           MI+  G NVY  E+E+ +A   +VL  A IG  +D  GE V   +V+R+  +L  + VIA
Sbjct: 413 MIVSGGENVYSAEVENAIAQLPQVLMSAVIGVPDDKWGERVHAVIVRREGMALEAEAVIA 472

Query: 517 HCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRVLRE 552
           HCR+ + GYK P+ VEFRD LP +  GK+ +  LRE
Sbjct: 473 HCREQIAGYKCPRSVEFRDALPLSAAGKLQKFQLRE 508