Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  517 bits (1331), Expect = e-151
 Identities = 271/557 (48%), Positives = 368/557 (66%), Gaps = 11/557 (1%)

Query: 9   YPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAYLQND 68
           YP  VP  I+P+QY SL  MFE++  +YAD+P  + M   M+F +L+  S+A  A+LQ+ 
Sbjct: 9   YPAGVPHEIHPEQYRSLPHMFEEAFGRYADRPFSVCMERWMSFGELDTLSKALGAWLQSR 68

Query: 69  LKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIV 128
             L+ G RVA+M+PN+ Q+ V + GVLRAG   VNVNPLYT RELEHQL D+ A AIVI+
Sbjct: 69  -GLEPGARVAIMLPNIPQFAVTMCGVLRAGYTCVNVNPLYTARELEHQLKDSGATAIVIL 127

Query: 129 SNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLP-----GA 183
            NFA+TLE+++  T VKHVV+TS+G +L    G  +   V+++  +VP Y LP       
Sbjct: 128 ENFASTLEKVIERTPVKHVVMTSMGDLLGGLYGAWITIAVRHLAKIVPPYKLPLSDGRSV 187

Query: 184 ISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYG 243
               +A+ +GR         + + IAFLQYTGGTTG++KGA+LTHRN+VA  LQA+  + 
Sbjct: 188 TPFTQAITEGRGRPLGPDQSTLDSIAFLQYTGGTTGLSKGAVLTHRNIVAATLQAEAWFT 247

Query: 244 PVLQEGRELV----VTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYP 299
           P L    +L     + ALPLYH+FALT+ CLL I  G    LI NPRD   F+  L+K P
Sbjct: 248 PALTRAGDLSKVNSIAALPLYHIFALTL-CLLAIRQGSHMTLIPNPRDFNKFIAVLKKRP 306

Query: 300 FTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGL 359
           F  +  VNTLFNAL+ + +F  LDF  + ++  GGMA     A +W +TTG  ++EG+G+
Sbjct: 307 FHMLPAVNTLFNALLMHPEFKSLDFSTLFVSQAGGMAASEGTARKWFETTGCPMIEGWGM 366

Query: 360 TECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYW 419
           +E   + T NP   T++TG IGLP+PS E+ I DD GN +P  + GEL +RGP VM GY+
Sbjct: 367 SETCAIGTNNPVSNTEFTGTIGLPLPSIEIAIKDDEGNSLPVGESGELCIRGPNVMVGYY 426

Query: 420 QRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHG 479
            +P  T     A+G++ TGDI    + G   IVDRKKDMILVSGFNV+PNE+E+V++L  
Sbjct: 427 NQPAETAAAFTADGFMRTGDIAVMQEDGYSRIVDRKKDMILVSGFNVFPNELENVISLCP 486

Query: 480 KVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPK 539
            V+E AA+G  ++  GE +K++VV+RDP+LT+D V+ +C   LTGYK PK +EFR+ LPK
Sbjct: 487 GVVECAAVGVPDEKQGEAIKVFVVRRDPALTEDAVLQYCHSQLTGYKRPKHIEFRESLPK 546

Query: 540 TNVGKILRRVLREENDA 556
           TNVGKILRR LR    A
Sbjct: 547 TNVGKILRRELRTSASA 563