Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., long-chain-fatty-acid--CoA ligase from Variovorax sp. OAS795

 Score =  241 bits (616), Expect = 4e-68
 Identities = 171/561 (30%), Positives = 274/561 (48%), Gaps = 19/561 (3%)

Query: 4   PWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAA 63
           P    +PK V   +   +   L +  + +  +Y D+PA    G  + + +L ER  A AA
Sbjct: 9   PHFRFWPKGVARHLRVPR-ARLPDYLDTAARRYPDKPAIAYCGTTLAYARLRERVDALAA 67

Query: 64  YLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADAR 123
           YLQ  L +  GDRV L   N  Q+  A + VLRAG + V VNP+    E+ H   D+ AR
Sbjct: 68  YLQQRLGVAPGDRVLLASQNCPQFVTAFYAVLRAGGVVVPVNPMSKAAEVRHHALDSGAR 127

Query: 124 AIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGA 183
              +  +    L     + +++ V++ +    +  + G   D + ++V       D    
Sbjct: 128 VACVAQDLLAALTLGEGDGELRAVLVHAYADAVDASVGD--DVLPEWVTAPRAPLDDARL 185

Query: 184 ISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYG 243
               +A+  G  L      +S +D+A L YT GTTG  KG + TH  ++A+ L +   + 
Sbjct: 186 HGFEQAIAPG--LVPADLPLSPDDLAVLPYTSGTTGHPKGCMHTHATLLAS-LASSAVWK 242

Query: 244 PVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKEL-QKYPFTA 302
            +  E   L V   PL+H+  L     L + +G   +++  PR  P     L +++  TA
Sbjct: 243 QLHVETVTLAVA--PLFHMLGLQNGMNLPMFLGATAVMM--PRWDPAMAARLIERHAVTA 298

Query: 303 ITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTEC 362
            +    +   L ++ +  + D  ++ L  GGG A+  AVA   ++  G+   EGYGLTE 
Sbjct: 299 WSAPPAMVIDLFSHPEADQRDLSSLALLSGGGAAMPEAVAAMLQQRHGLSYNEGYGLTET 358

Query: 363 SPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAG-NVVPNDQVGELQVRGPQVMQGYWQR 421
           +  +  NP         +G+P    + RIVD      +P  + GEL  RG QVM+GYW+ 
Sbjct: 359 ASFLHANP-PARGKRQCLGMPTQGVDSRIVDPVTFEELPPGETGELVTRGAQVMKGYWRN 417

Query: 422 PEATKEV---LNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALH 478
           PEA +E    +  + +  TGD+   D++G   + DR K MI  SG+ V+P E+E+ +  H
Sbjct: 418 PEADREAFIEIGGQRFFRTGDLASMDEEGYFFLRDRLKRMINASGYKVWPTEVENAMYEH 477

Query: 479 GKVLEVAAIGQANDVSGELVKIYVVKRDPS---LTKDEVIAHCRKHLTGYKVPKLVEFRD 535
             + E   I   +   GE VK  VV +      + ++E++A CR+ +  YK P++VEF D
Sbjct: 478 PAIHEACVIAVPDGKRGESVKALVVLKPAQRGLVGEEEIVAWCRERMAVYKAPRVVEFLD 537

Query: 536 DLPKTNVGKILRRVLREENDA 556
            LPK+  GKIL R L+E + A
Sbjct: 538 RLPKSGTGKILWRELQEAHRA 558