Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

 Score =  305 bits (781), Expect = 3e-87
 Identities = 204/578 (35%), Positives = 304/578 (52%), Gaps = 29/578 (5%)

Query: 2   DKPWLSRYPKDVP--ETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSR 59
           +K W   Y    P  +T  P    S+ +M  QS   +        MG   ++  + +  R
Sbjct: 5   EKIWREHYQHPTPWEQTFPP---MSMGDMVTQSATAHPQAHMIDFMGRKFSYGAMMDDIR 61

Query: 60  AFAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLND 119
             A  LQ  + +KKGDRV L +PN   Y  A +G L AG I VN +PLYT  ELEHQ+ D
Sbjct: 62  RIACGLQA-MGVKKGDRVGLYLPNTPHYVAAYYGALLAGTIVVNFSPLYTVAELEHQVED 120

Query: 120 ADARAIVIVSNFA--NTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPK 177
           +  + +  +S  A   T  +++ N+ ++ +V+ S+ ++LP AK  +     +     +P 
Sbjct: 121 SGTKILFTLSAKALLPTALKVLDNSSLEKLVVGSIAEVLPTAKSILFRLFKRGETTPLP- 179

Query: 178 YDLPGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQ 237
           +D P  I   + +        V       D+A LQYTGGTTG  KGA+LTH+N+ AN  Q
Sbjct: 180 HD-PRVIRYDRLIANAGEC-IVADIDPVNDVALLQYTGGTTGTPKGAMLTHQNLTANARQ 237

Query: 238 AKGAYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPR-DIPGFVKELQ 296
           A+ A  P   EG + ++  LP +HVFA T      +  GG  +++  PR +    +  +Q
Sbjct: 238 AQ-AIDPHAGEGDDRIIAVLPFFHVFANTCTLNRTVMNGGEMVML--PRFEAVQVLSAVQ 294

Query: 297 KYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEG 356
           +   T++ GV T++ AL+++     +DF +++  + GG  +   V ++++  TG  L+EG
Sbjct: 295 RTKATSLPGVPTMYQALLDHPALPNIDFSSLRTCISGGAPLPMEVKQKFEAVTGARLIEG 354

Query: 357 YGLTECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIV--DDAGNVVPNDQVGELQVRGPQV 414
           YGLTE SP+V  NPY+  + TG +G PVP T V+IV  +D     P  + GEL   GPQ+
Sbjct: 355 YGLTETSPIVCANPYEGLNKTGTVGQPVPGTRVKIVSREDPTQPPPEGEPGELMFAGPQI 414

Query: 415 MQGYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDV 474
           M+GYW RP+A  +V   E +L TGD+ + DD G + IVDR KDMI V GF V+P+++E V
Sbjct: 415 MKGYWNRPDADAQVFVGE-FLRTGDVGEVDDDGYVRIVDRLKDMIAVGGFKVFPSQVESV 473

Query: 475 VALHGKVLEVAAIGQANDVSGELVKIYVVKRD------PSLTKDEVIAHCRKHLTGYKVP 528
           +  H  V E   IG  +   GE  K +V   +      P L KD +     KH    +  
Sbjct: 474 LYHHESVKEALVIGVPDRYRGEQPKAFVTLNEGATIDGPGL-KDWLNPQLGKHERVCE-- 530

Query: 529 KLVEFRDDLPKTNVGKILRRVLREENDAQLAAKAKQSA 566
             VE R  LPKT VGK+ R+ L  E  A+      Q+A
Sbjct: 531 --VEVRASLPKTLVGKLSRKELVAEERAKAEQAMAQNA 566