Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  577 bits (1488), Expect = e-169
 Identities = 280/555 (50%), Positives = 393/555 (70%), Gaps = 7/555 (1%)

Query: 5   WLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAY 64
           W  + P  VP TI+ + Y S+VE+FE+S  ++AD+PAF N+G  +++ +LE  S AFAA+
Sbjct: 6   WNDKRPAGVPSTIDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAAW 65

Query: 65  LQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARA 124
           LQ    LK G+R+A+ MPN+LQYP+A+FG +RAG+I VN NPLYT RE+ HQ  D+ ARA
Sbjct: 66  LQQHTDLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARA 125

Query: 125 IVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAI 184
           +V ++ F   +++++ +T +++++   +G +LP AKG +V+ VV  +K MVP Y LP A+
Sbjct: 126 LVYLNMFGKRVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKLKKMVPAYRLPQAV 185

Query: 185 SMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAY-- 242
             ++ L +GR L      ++ +DIA LQYTGGTTG+AKGA+LTH N+VAN+LQ    +  
Sbjct: 186 PFKQVLREGRGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQ 245

Query: 243 -GP----VLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQK 297
            GP    +L++G+E+++  LPLYH++A T NC+  +  G  N+LITNPRDIPGF+KEL K
Sbjct: 246 HGPDGQKLLKDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKELGK 305

Query: 298 YPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGY 357
           + F+A+ G+NTLF AL+++  F +LDF  +K+   GG A+ +A AERW+  TG  ++EGY
Sbjct: 306 WRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCRIVEGY 365

Query: 358 GLTECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQG 417
           GLTE SP+ + NPY      G +G+PV  T  +++DD GN +P  + GEL ++GPQVM+G
Sbjct: 366 GLTETSPVASTNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGPQVMKG 425

Query: 418 YWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVAL 477
           YWQ+PEAT + L+AEGW  TGDI   D  G   IVDRKKDMI+VSGFNVYPNEIEDVV  
Sbjct: 426 YWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVVMG 485

Query: 478 HGKVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDL 537
           H KV   AAIG  ++ SGE VK++VV R+  L+ DE+ A+C+ + TGYKVPK +  R+ L
Sbjct: 486 HPKVANCAAIGVPDERSGEAVKLFVVPREGGLSVDELKAYCKANFTGYKVPKHIVLRESL 545

Query: 538 PKTNVGKILRRVLRE 552
           P T VGKILRR LR+
Sbjct: 546 PMTPVGKILRRELRD 560