Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  226 bits (577), Expect = 1e-63
 Identities = 160/550 (29%), Positives = 263/550 (47%), Gaps = 31/550 (5%)

Query: 27  EMFEQSVHKYADQPAFMN--MGAVMTFRKLEERSRAFAAYLQNDLKLKKGDRVALMMPNL 84
           + F+ +V +  D  A ++   G   ++R+L E+   +A  L   L +  GDRV +  PN 
Sbjct: 22  QAFDATVARCCDSEALVSRHQGLRYSWRQLAEQVEIYARALIA-LGVNTGDRVGIWSPNC 80

Query: 85  LQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIVSNFANTLEQIVANTQV 144
            Q+ +      + G I VN+NP Y   ELE+ L  +  R +V    F  +    +    V
Sbjct: 81  AQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELV 140

Query: 145 KHVVLTSLGQM----LPRAKGTIVDFVVKYVKGMVPKY---DLPGAISMRKALHKGRRLQ 197
             +   + G++    LP  +G ++        G +P +   +  G  S+     + + LQ
Sbjct: 141 PELASAAPGELASECLPELRG-VISLAANPPAGFLPWHAFAERAGQTSVEACTARQQSLQ 199

Query: 198 YVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGPVLQEGRELVVTAL 257
           + +P         +QYT GTTG  KGA L+H N++ N      + G      R+ +V  +
Sbjct: 200 FDQPVN-------IQYTSGTTGAPKGATLSHYNILNNGFMVGESLGLT---ARDRMVIPV 249

Query: 258 PLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFTAITGVNTLFNALVNNE 317
           PLYH F + +  L  I  G   +   +  D    ++ + +   T + GV T+F A++++ 
Sbjct: 250 PLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAMLDHP 309

Query: 318 DFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLE---GYGLTECSP--LVTGNPYD 372
               +D   ++  +  G      V  R      +H+ E    YG+TE SP  L TG   D
Sbjct: 310 SRAHMDLSTLRSGIMAGATCPIEVMRR--VIDQMHMAEVQIAYGMTETSPVSLQTGPDDD 367

Query: 373 LTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEATKEVLNAE 432
           L      +G   P  E ++VD  G +VP  ++GEL  RG  VM GYW  P+AT + ++  
Sbjct: 368 LELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPA 427

Query: 433 GWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQAND 492
           GW+ +GD+   D+QG + IV R KDMI+  G N+YP E+E+    H  V +   IG    
Sbjct: 428 GWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCS 487

Query: 493 VSGELVKIYVVKRDP--SLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRVL 550
             GE +  + +K  P  S T +E+   C+  +  +KVP+ + F D+ P T  GK+ +  +
Sbjct: 488 RYGEEIVAW-IKLHPGHSATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRM 546

Query: 551 REENDAQLAA 560
           RE + A++AA
Sbjct: 547 REISVAEIAA 556