Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  225 bits (574), Expect = 3e-63
 Identities = 159/565 (28%), Positives = 276/565 (48%), Gaps = 30/565 (5%)

Query: 7   SRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAYLQ 66
           + +P   P  +   Q  +L      S  ++ D+P  +     +++ +    +   A +LQ
Sbjct: 6   AHWPPGQPRQLTLPQ-TNLFHNLAVSAARFPDKPFIVFYDTPLSYAQCLNEAEHIAGHLQ 64

Query: 67  NDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIV 126
               ++ GDRV L M N  Q+ +A +G+LRA  + V VNP+    EL H L+D+ A+   
Sbjct: 65  QVCGVRPGDRVLLCMQNSPQWALAFYGILRANAVVVPVNPMNRVEELRHCLSDSGAQVAF 124

Query: 127 IVSNFANTLEQIVANTQ--VKHVVLTSLGQML-PRAKGTIVDFVVKYVKGMVPKYDL--P 181
           +  +    L+ ++      ++H+V+ +    L    +  + DFV        P+  +  P
Sbjct: 125 VAQDLLPQLQPLLTTEDEGLRHLVVATYSDHLRVPTELRVPDFVA------APRLPVAGP 178

Query: 182 GAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGA 241
           G ++    +   R    +      +D+  + YT GTTG+ KG + THR++++ ++     
Sbjct: 179 GLVAWSDVVAAARTPGLLT--AGPDDLCAMPYTSGTTGLPKGCMHTHRSVMSTLVGGVRW 236

Query: 242 YGPVLQEGRELVVTALPLYHVFAL--TVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYP 299
           +G        + ++ LP +HV  L  ++N  L+    G  L++ +  D       +Q+Y 
Sbjct: 237 FG---TSQDAVCLSVLPFFHVTGLSGSLNGPLY---AGATLVVLSRWDREVAAICMQRYR 290

Query: 300 FTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGL 359
            T    ++T+    + +      D  ++    GGG A+  AVA R +  TG H +EGYG+
Sbjct: 291 VTMWQAISTMVIDFLAHPQLDHFDLASLACVRGGGAAMPDAVAARLQALTGQHYIEGYGM 350

Query: 360 TECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVD-DAGNVVPNDQVGELQVRGPQVMQGY 418
           +E       NP         +GLPV   + R++D D     P  + GE+ V GPQ+MQGY
Sbjct: 351 SETMAATHINPTH-RPKPQCLGLPVFDVDARVLDPDTLAERPIGETGEIVVHGPQLMQGY 409

Query: 419 WQRPEATKEV---LNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVV 475
           W+ P+AT E    ++ + +L TGD+   D++G   + DR K MI  SGF V+P E+E ++
Sbjct: 410 WRNPQATSEAFIDIDGKRFLRTGDLGHVDEEGYFFMTDRLKRMINASGFKVWPAEVEALM 469

Query: 476 ALHGKVLEVAAIGQANDVSGELVKIYVVKRDPS---LTKDEVIAHCRKHLTGYKVPKLVE 532
             H  + E   IG  +   GE VK  VV R      +++ +VI     H+  YK P++VE
Sbjct: 470 YHHPAIQEACVIGVRDARRGETVKALVVLRPDQRGRISEQDVIDWAHGHMAAYKSPRIVE 529

Query: 533 FRDDLPKTNVGKILRRVLREENDAQ 557
           F + LP++  GK++ R L+E+  A+
Sbjct: 530 FVETLPRSGSGKVMWRELQEQQAAR 554