Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  476 bits (1225), Expect = e-138
 Identities = 248/539 (46%), Positives = 354/539 (65%), Gaps = 14/539 (2%)

Query: 25  LVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFAAYLQNDLKLKKGDRVALMMPNL 84
           L  + E+S  ++A QP  + M   M++ +L+E S A  A+LQ    L  G RVA+M+PN+
Sbjct: 1   LTALLEESFKQHARQPVSVCMEQWMSYGELDELSAAMGAWLQGR-GLVPGARVAVMLPNV 59

Query: 85  LQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIVSNFANTLEQIVANTQV 144
            Q+ + +  ++RAG   VNVNPLYT RELEHQL D+ A+AIVI+ NFA+TLEQ++  T +
Sbjct: 60  PQFLITMAAIVRAGYTVVNVNPLYTARELEHQLKDSGAQAIVILENFAHTLEQVINQTSI 119

Query: 145 KHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPG--------AISMRKALHKGRRL 196
           +HVV+ SLG  L    G  + F V+++  MVP Y L           +S R A+ +G  +
Sbjct: 120 EHVVIASLGDQLGFWYGRWITFAVRHLAKMVPAYKLARNGPLGERTIVSFRHAVAEGSGM 179

Query: 197 QYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGPVLQEGRELV--- 253
           +      + + +AFLQYTGGTTG++KGA+LTHRN++A +LQA+  + P L +  +L    
Sbjct: 180 RLKPGNDTLDSVAFLQYTGGTTGLSKGAVLTHRNIIAAILQAEAWFKPALNKVGDLRQVN 239

Query: 254 -VTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFTAITGVNTLFNA 312
            + ALPLYH+FALT++ LL I  G    L+ NPRDIP  V  L++  F     VNTLFNA
Sbjct: 240 GIAALPLYHIFALTLS-LLTIRWGAHMTLVPNPRDIPQLVATLKRRAFHVFPAVNTLFNA 298

Query: 313 LVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTECSPLVTGNPYD 372
           L+ N  F +LDF ++ L+  GGMA     A +WK  TG  ++EG+G++E   + T NP  
Sbjct: 299 LLQNPQFRQLDFSSLALSQAGGMAASEGTARQWKAVTGCTMIEGWGMSETCAIGTNNPVT 358

Query: 373 LTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEATKEVLNAE 432
              ++G IGLP+P  ++ I D+ G  +P  + GE+ ++GP VM GY+++PE T      +
Sbjct: 359 SQQFSGTIGLPLPGIDIAIKDEDGRSLPLGETGEICIKGPNVMSGYYEQPEETARAFTPD 418

Query: 433 GWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQAND 492
           G++ TGD+   D QG   IVDRKKDMILVSGFNV+P+E+E+V++L   VLE AAIG  +D
Sbjct: 419 GFMRTGDVGVMDPQGFTRIVDRKKDMILVSGFNVFPSELENVISLCPGVLECAAIGIEDD 478

Query: 493 VSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRVLR 551
             GE VK++VV+ DP+L +++V  +C+ +LTGYK PKL+EFRD+LPK+NVGKILRR LR
Sbjct: 479 KQGEAVKVFVVRSDPTLREEDVARYCQDNLTGYKRPKLIEFRDELPKSNVGKILRRALR 537