Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., acyl-CoA synthase (NCBI) from Escherichia coli BW25113

 Score =  817 bits (2111), Expect = 0.0
 Identities = 403/562 (71%), Positives = 470/562 (83%), Gaps = 1/562 (0%)

Query: 1   MDKPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRA 60
           M K WL+RYP DVP  INPD+Y SLV+MFEQSV +YADQPAF+NMG VMTFRKLEERSRA
Sbjct: 1   MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRA 60

Query: 61  FAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDA 120
           FAAYLQ  L LKKGDRVALMMPNLLQYPVALFG+LRAGMI VNVNPLYTPRELEHQLND+
Sbjct: 61  FAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS 120

Query: 121 DARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL 180
            A AIVIVSNFA+TLE++V  T V+HV+LT +G  L  AKGT+V+FVVKY+K +VPKY L
Sbjct: 121 GASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHL 180

Query: 181 PGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKG 240
           P AIS R ALH G R+QYVKP +  ED+AFLQYTGGTTGVAKGA+LTHRNM+AN+ Q   
Sbjct: 181 PDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA 240

Query: 241 AYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPF 300
            YGP+L  G+ELVVTALPLYH+FALT+NCLLFIE+GG+NLLITNPRDIPG VKEL KYPF
Sbjct: 241 TYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPF 300

Query: 301 TAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLT 360
           TAITGVNTLFNAL+NN++F +LDF ++ L+ GGGM VQ+ VAERW K TG +LLEGYGLT
Sbjct: 301 TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLT 360

Query: 361 ECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQ 420
           EC+PLV+ NPYD+  ++G+IGLPVPSTE ++VDD  N VP  Q GEL V+GPQVM GYWQ
Sbjct: 361 ECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQ 420

Query: 421 RPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGK 480
           RP+AT E++   GWL TGDI   D++G + IVDRKKDMILVSGFNVYPNEIEDVV  H  
Sbjct: 421 RPDATDEIIK-NGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPG 479

Query: 481 VLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKT 540
           V EVAA+G  +  SGE VKI+VVK+DPSLT++ ++  CR+ LTGYKVPKLVEFRD+LPK+
Sbjct: 480 VQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKS 539

Query: 541 NVGKILRRVLREENDAQLAAKA 562
           NVGKILRR LR+E   ++  KA
Sbjct: 540 NVGKILRRELRDEARGKVDNKA 561