Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., Long-chain-fatty-acid--CoA ligase from Alteromonas macleodii MIT1002

 Score =  221 bits (564), Expect = 5e-62
 Identities = 162/553 (29%), Positives = 266/553 (48%), Gaps = 23/553 (4%)

Query: 27  EMFEQSVHKYADQPAFM--NMGAVMTFRKL-EERSRAFAAYLQNDLKLKKGDRVALMMPN 83
           + F+  V  Y D PA +  +     T+++   E  R     L N ++   GDRV +  PN
Sbjct: 34  QYFKNVVDNYGDNPAIIVKHQDVSWTYQQYWYEVERVACGLLANGVE--PGDRVGIWSPN 91

Query: 84  LLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIVSNFANTLEQIVANTQ 143
            +++ +      R G I V +NP Y P EL   +N+   + +V+  +F  +    VA  +
Sbjct: 92  NIEWSIVQMATARIGAIMVCLNPAYRPDELAFAINNVSVKYLVMAQSFKQS--NYVAMLK 149

Query: 144 VKHVVLTSLGQMLPRAKGTIVDFV-VKYVK--GMVPKYDLPG--AISMRKALHKGRRLQY 198
                + S  +  PR   T+     +KYV   G  P   L    A+ +        +L+ 
Sbjct: 150 ELAPEIDSQDKNTPRRPLTLAKLPSLKYVYTIGDKPVEGLQAFSALQIEPTEALKSQLEA 209

Query: 199 VKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGPVLQEGRELVVTALP 258
           V+  +S +D   +Q+T GTTG  KGA LTHRN++ N L    A   +    ++ +   +P
Sbjct: 210 VESNLSADDNINIQFTSGTTGNPKGATLTHRNILNNGLLVSQA---MRFTHKDKLCIPVP 266

Query: 259 LYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFTAITGVNTLFNALVNNED 318
           LYH F + +  L+ +  G   +      D    ++ +++   T + GV T+F A +   +
Sbjct: 267 LYHCFGMVLGNLVCLASGACAVFPGESFDPETTLRTVEEEKCTGLHGVPTMFIAELELSN 326

Query: 319 FHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLE---GYGLTECSPL--VTGNPYDL 373
           F   D   ++  V  G      +    K  +  H+ E   GYG TECSP+  +T      
Sbjct: 327 FKAFDLSTLRTGVMAGSTCPEELMR--KVHSEFHMTEVVIGYGQTECSPINHITDIDSPF 384

Query: 374 TDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEATKEVLNAEG 433
                 +G  +P TEV+I+D  GN VP  + GE+  RG  VM+GYW     TK  ++ EG
Sbjct: 385 EKQVKTVGRAMPHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEVKTKATIDDEG 444

Query: 434 WLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQANDV 493
           WL +GD+ + D++G + IV R KDMI+  G N+YP EIE+V+  H  V + A  G  ++ 
Sbjct: 445 WLHSGDLGEMDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNK 504

Query: 494 SGELVKIYV-VKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRVLRE 552
            GE V +++  K +  + +D++  + +  L  +KVPK +    + P T  GK+ +  +RE
Sbjct: 505 YGEQVCLWIKAKENRHIDEDQIRDYLKSKLAYFKVPKYISVVKEYPMTVTGKLQKFKMRE 564

Query: 553 ENDAQLAAKAKQS 565
                L  +A Q+
Sbjct: 565 YMIETLKKQALQT 577