Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., Long-chain-fatty-acid--CoA ligase from Alteromonas macleodii MIT1002

 Score =  696 bits (1796), Expect = 0.0
 Identities = 342/552 (61%), Positives = 429/552 (77%), Gaps = 2/552 (0%)

Query: 1   MDKPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRA 60
           M+K WL  Y   V   I+ D+Y S+V++FEQSV K+ ++ AF+NMG  +TF +L+  S  
Sbjct: 1   MEKTWLKHYDPRVSAEIDADRYASVVDIFEQSVKKFKNKEAFINMGHSITFEELDTLSAQ 60

Query: 61  FAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDA 120
           FAAYLQ    LK+GD VA+MMPNLLQYPVA+FG+LRAGM+ VNVNPLYT REL+HQLNDA
Sbjct: 61  FAAYLQAS-GLKRGDAVAIMMPNLLQYPVAMFGILRAGMVVVNVNPLYTARELKHQLNDA 119

Query: 121 DARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL 180
           +A+AIVIV NFA TLE+++A+T ++ V LT+LG MLP  K  IV+ VVKYVK MVP ++L
Sbjct: 120 NAKAIVIVENFACTLEEVIADTNLQEVFLTALGDMLPAPKRWIVNAVVKYVKKMVPSFNL 179

Query: 181 PGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKG 240
           P   S   A+ KG+ L+Y +P +   D+AFLQYTGGTTGV+KGA+LTHRNMVAN+ Q  G
Sbjct: 180 PETTSFMSAVKKGQSLEYKRPDIDSGDLAFLQYTGGTTGVSKGAMLTHRNMVANLEQVSG 239

Query: 241 AYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPF 300
               V++EG + VVTALPLYH+FAL  NCL+F++ G RNLLITNPRD+P FV EL KYPF
Sbjct: 240 ILETVIEEGEDFVVTALPLYHIFALLANCLMFVKYGCRNLLITNPRDMPAFVNELSKYPF 299

Query: 301 TAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLT 360
           T + GVNTLFN L+N   F ELDF   K  +GGGMAVQR VAE+W+K TG  LLEGYGLT
Sbjct: 300 TILPGVNTLFNGLLNTPGFSELDFSKFKFGLGGGMAVQRPVAEKWEKVTGTVLLEGYGLT 359

Query: 361 ECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQ 420
           ECSP+V  NP  +  Y GAIG+PVPST+++++DD GN V   + GE+ V+GPQVM+GY  
Sbjct: 360 ECSPVVAVNPPQIEAYKGAIGMPVPSTDIKLLDDDGNPVEKGEPGEMWVKGPQVMKGYLN 419

Query: 421 RPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGK 480
           RPEAT+E+L  +GWL+TGDI   DD+G  +IVDRKKDMILVSGFNV+PNEIE+V A+H  
Sbjct: 420 RPEATEEILK-DGWLATGDIATVDDEGYFYIVDRKKDMILVSGFNVFPNEIEEVAAMHEN 478

Query: 481 VLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKT 540
           ++E AA+G  ++VSGE+VK++VV+   SLT+ +VIAHCR HLTGYKVPK V F+DDLPKT
Sbjct: 479 IVEAAAVGVPHEVSGEVVKLFVVRNSDSLTEKDVIAHCRNHLTGYKVPKQVVFKDDLPKT 538

Query: 541 NVGKILRRVLRE 552
           NVGKILRR LR+
Sbjct: 539 NVGKILRRELRD 550