Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

 Score =  584 bits (1505), Expect = e-171
 Identities = 299/557 (53%), Positives = 398/557 (71%), Gaps = 7/557 (1%)

Query: 3   KPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRAFA 62
           K WL+ YP  VP  I      SL+++ E+S  ++AD+ AF +MG  +T+R+L+  +RA A
Sbjct: 16  KRWLASYPPGVPSEIPASANASLIDLLEKSCKQFADRKAFSSMGKSLTYRELDADTRAVA 75

Query: 63  AYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADA 122
           A+LQ+   L+KGDRVA+MMPN+LQ PVA++G+LRAGM+ VNVNPLYTPRELEHQL D+ A
Sbjct: 76  AWLQSR-GLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLYTPRELEHQLKDSGA 134

Query: 123 RAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPG 182
           +A+ ++ NFA+  +Q V  T V+HVV+ ++G +L   KG IV+ VV+ VK +VP + +PG
Sbjct: 135 KALFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLG-LKGHIVNLVVRKVKKLVPAHAIPG 193

Query: 183 AISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAK--- 239
           +IS +  L +G+ +      ++ +DIAFLQYTGGTTGV+KGA+LTH N++AN  Q     
Sbjct: 194 SISFKAMLKEGQGVSLKPVGLTAQDIAFLQYTGGTTGVSKGAVLTHANLLANKAQISLWL 253

Query: 240 -GAYGPVLQEGREL-VVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQK 297
             A+         L  + ALPLYH+FALTVN L+ I +GG NLLI NPRDIPGFVKEL  
Sbjct: 254 DAAFNGRKDRPEVLNFICALPLYHIFALTVNSLMGIALGGHNLLIANPRDIPGFVKELSH 313

Query: 298 YPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGY 357
           Y      G+ TLFNAL+NNE+F +LD  ++   +GGGMAVQR VAERW    G  + EGY
Sbjct: 314 YQPHIFPGLTTLFNALMNNEEFRKLDLSSLIFVLGGGMAVQRPVAERWVSVVGCPITEGY 373

Query: 358 GLTECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQG 417
           GL+E SP+ T N  D  +++G IGLP+ STE+ I D+ GN +P  +VGE+ +RGPQVM G
Sbjct: 374 GLSETSPVATVNRLDAAEFSGTIGLPISSTEIDIRDEDGNSLPTGEVGEICIRGPQVMAG 433

Query: 418 YWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVAL 477
           YWQRP+ T + + A+G+  +GD+   D++G   IVDRKKDMILVSGFNVYPNE+E+V A 
Sbjct: 434 YWQRPDETAKAITADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGFNVYPNEVEEVAAS 493

Query: 478 HGKVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDL 537
           H  VLE AAIG  ++ SGE VK++VVK+D SLT+ E+ A C K+LT YK PK++EFR DL
Sbjct: 494 HPGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKNLTNYKRPKIIEFRTDL 553

Query: 538 PKTNVGKILRRVLREEN 554
           PK+NVGKILRR LR  N
Sbjct: 554 PKSNVGKILRRELRNLN 570