Pairwise Alignments

Query, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., Long-chain-fatty-acid--CoA ligase from Acinetobacter radioresistens SK82

 Score =  402 bits (1033), Expect = e-116
 Identities = 223/571 (39%), Positives = 345/571 (60%), Gaps = 35/571 (6%)

Query: 3   KPWLSRYPKDVPETINPDQYPS------LVEMFEQSVHKYADQPAFM-----NMGAVMTF 51
           +PW     K++P ++   Q+ +      L ++F ++VH ++D  AF       +   ++F
Sbjct: 6   RPW----KKNLPASLQDYQFDATSIPQNLSQLFNKTVHDFSDAAAFSLVLPTGLTKTLSF 61

Query: 52  RKLEERSRAFAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPR 111
           ++++  S   A Y Q++L+L+ GD V L MPN L YP+A+F   +AG+I  N+NPLYT R
Sbjct: 62  KQIQYYSDLLARYFQHELQLQPGDVVGLQMPNCLHYPIAVFACWKAGLIITNINPLYTAR 121

Query: 112 ELEHQLNDADARAIVIVSNFANTLEQIVA-NTQVKHVVL--TSLGQMLPRAKGTIVDFVV 168
           ELE+QLND+ A+A+++   F  T E+++A N  +K + L   SL          ++   +
Sbjct: 122 ELEYQLNDSQAKALIVSDMFLATFEKVIAKNNDLKSLALITASLSDFFDAPYQALIAKKI 181

Query: 169 K-----YVKGMVPKYDLPGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKG 223
           +       + + P  D     S  +   +  +L  ++   +   IA  QYTGGTTG +KG
Sbjct: 182 ETDAEAQGRSLTPSIDY---FSFSQVFKRAEQLPELQSQTTA--IALYQYTGGTTGRSKG 236

Query: 224 AILTHRNMVANVLQAKG---AYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNL 280
           AI+TH+N+++ V        A+     + ++ ++TA+PLYH+FA +VN L+F E G  N+
Sbjct: 237 AIITHQNLLSLVRMTGDYLRAHNSAFNQ-QDSILTAIPLYHIFAFSVNFLMFFEGGSHNI 295

Query: 281 LITNPRDIPGFVKELQKYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRA 340
           L+ +PR I       +++  T +TGV+TL+  L+  ED+   +   +  A+ GG A++ A
Sbjct: 296 LVPSPRPISNLRPAFEQFKITWLTGVDTLYAGLLA-EDWFVQNPPELTCAISGGTALRPA 354

Query: 341 VAERWKKTTGVHLLEGYGLTECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVP 400
            AE WK   G +++EG+G+TE S     +P       G++G P+P +E++IVD  GN VP
Sbjct: 355 TAEHWKAKIG-NIIEGFGMTETSCAAMLHPPISIIRQGSVGFPLPGSEIKIVDVQGNEVP 413

Query: 401 NDQVGELQVRGPQVMQGYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMIL 460
               GEL V+GP ++QGY  RPE + +    EGWL TGDI + D+ G  +I+DRKKDM+L
Sbjct: 414 LGSAGELCVKGPHIVQGYLNRPEESADTF-VEGWLHTGDIAQLDEDGFCYILDRKKDMVL 472

Query: 461 VSGFNVYPNEIEDVVALHGKVLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRK 520
           VSGFNVYPNEIE V+A H  ++EVA IG  +  +GE VK Y+  R+PSL+ DE++AHC++
Sbjct: 473 VSGFNVYPNEIEAVIAEHPDIIEVAVIGVPDVQTGEAVKAYIATRNPSLSTDEILAHCKE 532

Query: 521 HLTGYKVPKLVEFRDDLPKTNVGKILRRVLR 551
           HLT YKVPK++E   +LPK+ VGKILR  LR
Sbjct: 533 HLTAYKVPKVIEILPELPKSTVGKILRAELR 563