Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., ribonuclease D from Rhodanobacter sp000427505 FW510-R12

 Score =  150 bits (379), Expect = 6e-41
 Identities = 111/369 (30%), Positives = 176/369 (47%), Gaps = 26/369 (7%)

Query: 20  LQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLDEMTPFVELLQ 79
           LQ    A      V LDTEF+R  TF+PQL L+Q+      +L+DP   D        L 
Sbjct: 18  LQAWLAAVPAGAAVGLDTEFMRRNTFYPQLALLQLGWNGRYALVDPLAFDIGAALQPRLG 77

Query: 80  DTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQDQLQVELD 139
             + + ++H+ GEDLE         P  + DTQI AAF G GL   + ALV +   VELD
Sbjct: 78  SGAAVTIMHSAGEDLETLAPLLPEGPGQLFDTQIAAAFAGMGLGISYRALVAELAGVELD 137

Query: 140 KSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQV---TQAGWWDAALQESELQVA 196
           K E+R+DWL RPL+D Q  YAA DV YL  ++E+L E++    ++ W        +L+ +
Sbjct: 138 KGETRSDWLQRPLTDSQRNYAALDVVYLKTLHEQLAERLQRRDRSAWHAEDCARLKLRAS 197

Query: 197 KRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETDLLTIS 256
            R     P+ A   ++GA    P + A+L+ L  WR   A   D+   +++ +   L ++
Sbjct: 198 HREGDPQPQRA---LRGAADWPPAQQALLRRLLLWRDRSARRLDVPRPWLLDDALALNLA 254

Query: 257 RLALRSPKRMEEEGVDPHAIRRHSSKIIAMVKTALETPADAYPPEIVPIMEYPGY----- 311
           +   RS   +E+      A+R  S++   + +    T +D    EI      PG+     
Sbjct: 255 QQPPRSLGDLEQRSRGQRALR--SAQRGELFELLAATVSD---EEIAATARIPGHPQGEA 309

Query: 312 KQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQ-LLSWVWKRDRDPARLPDLMQGWRLPL 370
           K+    +K  V  ++    L    L  +K L + +++  W         P+ ++GWR  +
Sbjct: 310 KKALAAMKTLVDHLAGELDLPPGLLCPRKVLEEYVVTTEW---------PEFLEGWRREV 360

Query: 371 LGEKLNTLV 379
           L E+L  L+
Sbjct: 361 LHERLPALL 369