Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., Ribonuclease D (EC 3.1.26.3) from Sphingobium sp. HT1-2

 Score =  151 bits (381), Expect = 3e-41
 Identities = 94/268 (35%), Positives = 143/268 (53%), Gaps = 18/268 (6%)

Query: 11  YQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLD- 69
           + +I+    L   C     +  V +DTEF+R  +++P+L L+Q+ D    + IDP     
Sbjct: 4   HPLITDSKTLSDFCARMAKSPYVAVDTEFMRENSYWPELCLVQVADSSEAAAIDPKAPGI 63

Query: 70  EMTPFVELL-QDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAA 128
           ++TP ++LL  +  VLKV HA G+D+E+  N  G TP PM DTQI A  LG G   G+  
Sbjct: 64  DLTPLLDLLVNNEDVLKVFHAGGQDIEIVHNLTGKTPHPMFDTQIAAMALGLGEQIGYGN 123

Query: 129 LVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAAL 188
           LV   L V+LDK    TDW  RPL  +Q++YA  DV YL+ ++ K++E++ + G  D   
Sbjct: 124 LVDAWLGVQLDKGARFTDWARRPLDKRQIDYAIGDVTYLIEIFPKMLEELRKTGRGDWLD 183

Query: 189 QESELQVAKRTKVSNPELAYLDIKGAWQ------LKPKELAILKPLATWRYHEAVNRDLA 242
           QE E       ++S+P     D   AW+       K   L  LK LA WR  EA +++L 
Sbjct: 184 QEME-------RISDPSNYENDPSEAWKRVRIASRKADVLGRLKALAAWREKEAQDKNLP 236

Query: 243 LNFVIKETDLLTISRLALRSPKRMEEEG 270
              ++K+    T++ +A   P+  E+ G
Sbjct: 237 RGRIVKDE---TLADIASHPPRAQEDLG 261