Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., ribonuclease D from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  103 bits (258), Expect = 6e-27
 Identities = 74/253 (29%), Positives = 131/253 (51%), Gaps = 12/253 (4%)

Query: 9   VNYQIISQVGDLQRVCLAARDADVVMLDTEFVRTR-TFFPQLGLIQMFDGENLS-LIDPT 66
           V  ++I +   L         +  + LD EF + R T+   L L+Q+ D      +IDP 
Sbjct: 11  VTIKLIEEQEQLLETLATLSRSQELALDLEFDQNRFTYGFNLCLVQIADENGTCYIIDPF 70

Query: 67  VLDEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGF 126
            + ++ P  +L +D  + K++H    D+ +  +  GC    ++DT + A  L Y  S+  
Sbjct: 71  AVADLQPLFDLFEDGRITKIIHHSNNDI-LLLDKLGCNIRGVMDTDVAAKILNYERSS-L 128

Query: 127 AALVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAG---W 183
           A +++++  +E+DKS+  ++W  RPL++ QL+YAA DV YL  +  KLV+++   G   W
Sbjct: 129 ATVLKEEFDMEIDKSQQSSNWNKRPLTEAQLKYAAIDVIYLHRIKAKLVQEIADLGRLHW 188

Query: 184 WDAALQESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLAL 243
               LQE E Q+ +    S PE  +L +K A++L   +  ILK L  +R   A+  +   
Sbjct: 189 ----LQE-ENQLLEALTYSEPENPHLKLKNAFRLNFYQQHILKHLFAFRDQMAMQFNKPA 243

Query: 244 NFVIKETDLLTIS 256
           ++VI    L+ ++
Sbjct: 244 SYVISNEALVELA 256