Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., ribonuclease D from Magnetospirillum magneticum AMB-1

 Score =  169 bits (428), Expect = 1e-46
 Identities = 120/372 (32%), Positives = 184/372 (49%), Gaps = 29/372 (7%)

Query: 13  IISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLD-EM 71
           +IS    L   C   + A  V +DTEF+R +T++PQL L+Q+   +    IDP   D ++
Sbjct: 3   MISDTESLAAFCRRLKSAPFVTVDTEFMREKTYWPQLCLVQVAGPDEARAIDPLAPDMDL 62

Query: 72  TPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQ 131
            P  EL+ DT+VLKV HA  +D+E+F +     P P+ DTQI A   G+G S G+  L  
Sbjct: 63  APLFELMADTNVLKVFHAARQDVEIFLHLADAIPTPIFDTQIAAMVCGFGDSVGYETLAS 122

Query: 132 DQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQES 191
              +  +DKS   TDW  RPLS+KQ++YA ADV +L   YEKLV +V + G  +   +E 
Sbjct: 123 QLAKARIDKSMRFTDWSIRPLSEKQIQYALADVTHLRVAYEKLVRKVEKNGRIEWLSEEM 182

Query: 192 ELQVAKRTKVSNPELAYLDIKGAW-QLKPKE-----LAILKPLATWRYHEAVNRDLALNF 245
            L       ++ P    +D + AW +LKP+      LA+LK LA WR  EA  RDL    
Sbjct: 183 AL-------LTEPGTYRVDPENAWRRLKPRSTSGRFLAVLKELAAWREREAQERDLPRQR 235

Query: 246 VIKETDLLTISRLALRSPKRMEE----EGVDPHAIR-RHSSKIIAMVKTALETPADAYPP 300
           ++++    T++ +A   P    E     G+    +  +    I+  VK  +  P    P 
Sbjct: 236 ILRDE---TLTEIAAHHPTDTHELGRTRGIGKGLVEGKMGLAILEAVKRGMAMPEADCPK 292

Query: 301 EIVPIMEYPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLP 360
               +    G   + + LK  +K   +  G+A + +A+   ++ + +       D A +P
Sbjct: 293 PSDRVDVPKGLGPVVELLKVLLKMKCDEHGVAGKLIANSADIDAIAA------DDDADVP 346

Query: 361 DLMQGWRLPLLG 372
            L  GWR  L G
Sbjct: 347 AL-HGWRRDLFG 357