Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., Ribonuclease D (EC 3.1.26.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  335 bits (859), Expect = 1e-96
 Identities = 172/360 (47%), Positives = 241/360 (66%), Gaps = 1/360 (0%)

Query: 20  LQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLDEMTPFVELLQ 79
           L  +C A R    + LDTEFVRTRT++PQLGLIQ+FDG N++LIDP  + + +P   +L+
Sbjct: 8   LASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISDWSPLKAVLR 67

Query: 80  DTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQDQLQVELD 139
           DT + K LHA  EDLEVF NAFG  P P++DTQI+AAF G  LS GFA++V++   V LD
Sbjct: 68  DTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFASMVEEYTGVALD 127

Query: 140 KSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQESELQVAKRT 199
           KSESRTDWLARPLS++Q EYAAADV+YLLP+ +KL+ +   AGW  AAL E  L   +R 
Sbjct: 128 KSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECRLMQQRRQ 187

Query: 200 KVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETDLLTISRLA 259
           ++  PE A+ DI  AWQL+ ++LA L+ LA WR  +A  RD+A+NFV++E +L  ++R  
Sbjct: 188 EIQAPEEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDMAVNFVVREENLWAVARYM 247

Query: 260 LRSPKRMEEEGVDPHAIRRHSSKIIAMVKTALETPADAYPPEIVPIMEYPGYKQLFKRLK 319
             S   ++  G+    IR H   +I++V  A   P +A P  ++ +M+ PGY++ FK +K
Sbjct: 248 PGSLGELDSLGLSGSEIRFHGKTLISLVAKAQALPEEALPEPLLNLMDMPGYRKAFKAIK 307

Query: 320 DEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWRLPLLGEKLNTLV 379
             V  VS +  ++ E LAS++Q+NQLL+W WK      + P+L+ GWR  L+ EKL  L+
Sbjct: 308 ALVAEVSASHHVSGELLASRRQINQLLNWHWKLKPQNGQ-PELISGWRAELMEEKLTLLL 366