Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., ribonuclease D from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  164 bits (416), Expect = 3e-45
 Identities = 115/363 (31%), Positives = 184/363 (50%), Gaps = 32/363 (8%)

Query: 24  CLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLD-EMTPFVELLQDTS 82
           C    +A  + +DTEF+R  T++P+L LIQ    ++ ++IDP     ++ PF++LL+D  
Sbjct: 14  CARVANAPFITVDTEFMRETTYWPKLCLIQAASADHAAIIDPMAEGLDLEPFLDLLRDEK 73

Query: 83  VLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQDQLQVELDKSE 142
           ++KV HAC +D+E+F    G  P PM DTQ+ A   G+G    + +LV+  L++E+DK  
Sbjct: 74  IVKVFHACRQDVEIFVR-LGAMPKPMFDTQVAAMAAGFGEQVAYDSLVRQMLRIEVDKGS 132

Query: 143 SRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQESELQVAKRTKVS 202
             TDW  RPLS+ QL YA  DV +L  +Y KL +++ + G  +  + E E         +
Sbjct: 133 RFTDWARRPLSENQLVYALGDVTHLAALYPKLRDRLQKEGRLEWVMSEMESLTDPALYDT 192

Query: 203 NPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETDLLTISRLALRS 262
           NPE A+  +K   +   K LA  K +A WR   A  RD     ++K+     I  +A ++
Sbjct: 193 NPENAWKRLKPK-KFSAKYLAAFKAVAVWRERAAQERDQPRGRILKDEG---IDEIAQQT 248

Query: 263 PKRMEEEGVDPHAIRRHSS--KIIAMVKTALETPAD-----AYPPEIVPIMEYPGYKQ-- 313
           P        D  A  R  S  K     +  LE   +     A P    P ME P ++Q  
Sbjct: 249 P-------TDVEAFNRLRSVPKGFGGSRLGLELAEELKRVLADPESHAPEMERPAHRQPA 301

Query: 314 ---LFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWRLPL 370
              + + LK  +K+ S+ +G+A++ +A+   L ++         D A + D M+GWR  +
Sbjct: 302 PPSVVELLKVLLKAKSDNAGVASKLIATVSDLEKIAI------SDDADI-DAMKGWRRQI 354

Query: 371 LGE 373
            GE
Sbjct: 355 FGE 357