Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., ribonuclease D from Escherichia coli BL21

 Score =  340 bits (872), Expect = 4e-98
 Identities = 174/371 (46%), Positives = 249/371 (67%), Gaps = 1/371 (0%)

Query: 9   VNYQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVL 68
           +NYQ+I+    L  +C A R    + LDTEFVRTRT++PQLGLIQ+FDGE+L+LIDP  +
Sbjct: 1   MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGI 60

Query: 69  DEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAA 128
            + +P   +L+D S+ K LHA  EDLEVF N FG  P P++DTQI+AAF G  +S GFA+
Sbjct: 61  TDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFAS 120

Query: 129 LVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAAL 188
           +V++   V LDKSESRTDWLARPL+++Q EYAAADV+YLLP+  KL+ +   +GW  AAL
Sbjct: 121 MVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAAL 180

Query: 189 QESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIK 248
            E  L   +R +V  PE A+ D+  AWQL+ ++LA L+ LA WR  +A  RDLA+NFV++
Sbjct: 181 DECRLMQMRRQEVVAPEDAWRDMTNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR 240

Query: 249 ETDLLTISRLALRSPKRMEEEGVDPHAIRRHSSKIIAMVKTALETPADAYPPEIVPIMEY 308
           E  L +++R    S   ++  G+    IR H   ++A+V+ A   P +A P  ++ +M+ 
Sbjct: 241 EEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDM 300

Query: 309 PGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWRL 368
           PGY++ FK +K  +  VS T  ++ E LAS++Q+NQLL+W WK  +    LP+L+ GWR 
Sbjct: 301 PGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKL-KPQNNLPELISGWRG 359

Query: 369 PLLGEKLNTLV 379
            L+ E L+ L+
Sbjct: 360 ELMAEALHNLL 370