Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., ribonuclease D from Agrobacterium fabrum C58

 Score =  166 bits (419), Expect = 1e-45
 Identities = 114/364 (31%), Positives = 186/364 (51%), Gaps = 10/364 (2%)

Query: 13  IISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLD-EM 71
           +I     L   C     ++ + +DTEF+R  TF+P+L L+QM       L+DP     ++
Sbjct: 1   MIETTAALAEACTELAKSEFITIDTEFLRETTFWPELCLVQMASPTLEVLVDPLAKGIDL 60

Query: 72  TPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGFAALVQ 131
           TP  EL+ + +V+KV HA  +D+E+  +  G  P P+ DTQ+ A   G+G S  +  LVQ
Sbjct: 61  TPMFELMANPNVVKVFHAARQDIEIIYHLGGLIPHPIFDTQVAAMVCGFGDSISYDQLVQ 120

Query: 132 DQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQES 191
               V++DKS   TDW  RPL++KQL+YA ADV +L  +Y  L  Q+ + G      +E 
Sbjct: 121 KIKNVQIDKSSRFTDWSRRPLTEKQLDYALADVTHLRDVYLSLKAQLEREGRSLWLTEEM 180

Query: 192 ELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKETD 251
            +  ++ T   +P+ A+L +K   + KP ELAILK +A WR  EA +R++  + V+K+  
Sbjct: 181 NILESRDTYDMHPDDAWLRLKSRLR-KPTELAILKFVAAWREREARSRNVPRSRVLKDDG 239

Query: 252 LLTISRLALRSPKRMEEEGVDPHAIRRHSS--KIIAMVKTALETPADAYPPEIVPIMEYP 309
           +  I++   +  + +      P    R +S   II  V  AL  P +  P          
Sbjct: 240 IFEIAQQQPKDAEALSRLRTIPKGWERSASGTAIIETVNAALALPKEEMPKAPRHSHAPE 299

Query: 310 GYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWRLP 369
           G     + LK  +K  ++  G+A + +A+   L+++ S     + + A +  L  GWR  
Sbjct: 300 GSGAAVELLKVLLKLTADKHGVAAKVIANSDDLDKIAS-----EGENATVAAL-TGWRRE 353

Query: 370 LLGE 373
           L G+
Sbjct: 354 LFGD 357