Pairwise Alignments

Query, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., Ribonuclease D from Acinetobacter radioresistens SK82

 Score =  141 bits (356), Expect = 3e-38
 Identities = 100/368 (27%), Positives = 189/368 (51%), Gaps = 11/368 (2%)

Query: 11  YQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPTVLDE 70
           +Q I Q  DL++V        V  LDTEF++  TF+P+LG+ Q+   E + L+D T LD 
Sbjct: 2   FQFIEQQTDLEKVLYLMDQHPVYALDTEFIKVDTFWPKLGVFQINIAEQIFLLDGTTLD- 60

Query: 71  MTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMV-DTQIMAAFLGYGLSTGFAAL 129
           +T F + +       + HAC ED+++  +  G      V DTQ+  +FLG GL   +   
Sbjct: 61  LTAFWKKVYRAQQ-NIFHACSEDIDLIYHYAGPYSLSNVFDTQVGLSFLGQGLQVSYQNA 119

Query: 130 VQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGWWDAALQ 189
           ++  L ++++K ++R+DWLARPL+D+QL YAA DV YL  + E++  ++ Q   ++  L+
Sbjct: 120 LKLVLDIDIEKDQTRSDWLARPLTDEQLHYAANDVLYLGQLAEQIKTELKQKNLYECVLE 179

Query: 190 ESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNFVIKE 249
           + +    +  + +   L Y D+ G ++   ++L  L+ L+ WR       +   +F+++ 
Sbjct: 180 DCKHLTQEIAEETPLHLLYQDV-GNYRHTRRQLMQLQHLSVWREQMVKALNQPRSFILRN 238

Query: 250 TDLLTISRLALRSPKRMEE-EGVDPHAIRRHSSKIIAMVKTALETPADAYPPEIV-PIME 307
           + ++ +     R+  ++   + +    +R +   I+ ++K      A+ +P  +  PI +
Sbjct: 239 STMIDLVEKNPRNNFQLASIKDIRAGVVREYGKVILDLLK--FLPKAEEWPLRMARPIKQ 296

Query: 308 YPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPDLMQGWR 367
               K   +++ + +++V   + +  E L  KK +N L   V     D   LPD + GWR
Sbjct: 297 --ASKTTAEQVDNLIQTVVEETKVPKEVLLRKKWMNSLYQHVVFHG-DEQNLPDYLLGWR 353

Query: 368 LPLLGEKL 375
             +L + L
Sbjct: 354 YEILTKPL 361