Pairwise Alignments

Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 113/486 (23%), Positives = 190/486 (39%), Gaps = 67/486 (13%)

Query: 19  PKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACTQV 78
           P + A+ +     TW++   +    A AL   G+  G+ V++   N    +         
Sbjct: 33  PDRTAVIYGEVRYTWRMFAQRCRQLASALISAGIERGDTVSIFSLNTPAMLEAQFGIPLS 92

Query: 79  GALC------------AFLAPQPLARL---QEKLATLYAEQSPKHLWLAPSCALSEEDIT 123
           GA+             AF+     AR+     +LA +   Q    L  AP   +  +D +
Sbjct: 93  GAVINCLNSRLDAPAVAFILAHSEARIFLVDRQLAPV--AQEALRLMEAPPRVIDIDDPS 150

Query: 124 ALNAHRLSLPDERDESVGGEKVSS----QFSGEQLATLIFTSGSTGTPKAVAHTHQQHLV 179
             +   L   +       G+  +     Q   + +A L +TSG+TG PK V + H+   +
Sbjct: 151 GADFPLLGDTEYETFIAAGDPAAELRWPQDEWDAIA-LNYTSGTTGDPKGVVYHHRGAYL 209

Query: 180 SARG-LLNKFAFTESDSWLLSLPLYHISGVAILYRWLAVGATL----KIGTGDLQNDIA- 233
           +A G ++N         +L +LPL+H +G    +   AVG T     K+    +   I+ 
Sbjct: 210 NALGQIINGRMTGARPVYLWTLPLFHCNGWCFAWALAAVGGTQICMRKVSAEGMYQAISE 269

Query: 234 -GVTHASLVPTQLKRLLDSSS-----PLTLKRVLLGGSHIPVELAQMAATRGIDTWLGYG 287
            GVT     P  L  L D +      P    RVL GG+  P  + +     G +    YG
Sbjct: 270 HGVTLLCGAPIVLGFLADGAPSDWTPPAAPIRVLSGGASPPAPVFKRLGELGFEVVHLYG 329

Query: 288 MTEAASTVTA-------------KRVDGLAGNG-------ELLEHRELRLVD-------- 319
           MTE     T              +R+  +A  G       E++    L L          
Sbjct: 330 MTEMHGVTTLCEPQEAWDDLDIDERMKHVARQGVRAVLADEMIVGDPLTLEPVPRDGQTI 389

Query: 320 GRIFIAGKTLAQGYYRQGQLVPLTNEQGWFDSKDLGRWQGNNLL-IDGRADNLFISGGEN 378
           G +F+ G    +GY +  +         W+ + DL     +  + +  R+ ++ ISGGEN
Sbjct: 390 GEVFMRGNIAMKGYLKNPKATEEAFAADWYHTGDLAVIHDDGYIEVKDRSKDIIISGGEN 449

Query: 379 VHCEEIEAVLNQHPHVQVAIVIPVQDSEFGARPVAVIRSEAEWCQAIGDT----WCQGKL 434
           +   E+E  L  HP +  A V+ V D ++G  P AV+  +      I +     +C+ +L
Sbjct: 450 ISSIEVEEALYSHPWIAGAAVVAVPDPKWGETPCAVVELKPGAPGGITEADVIRYCRERL 509

Query: 435 EKFKWP 440
             +K P
Sbjct: 510 AAYKCP 515