Pairwise Alignments

Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., Medium-chain fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score = 88.6 bits (218), Expect = 5e-22
 Identities = 104/452 (23%), Positives = 172/452 (38%), Gaps = 69/452 (15%)

Query: 27  AGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACTQVGALCAFLA 86
           A + LT+  LD      A  LR  G+   +V++    N    V+ ++AC ++G +  F  
Sbjct: 52  ARRELTYAELDRLAWRAAAGLRRLGLGKDDVLSCQLPNGWEFVVLYIACLRLGIV--FNP 109

Query: 87  PQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALNAHRLSLPDERDESVGGEKVS 146
             P+ R  E   +         ++  P      +     +  +  LPD R   V G    
Sbjct: 110 VMPIFREHE--LSFMLRHGETKVFAVPRVFRGFDHEAMAHRLKADLPDLRHLVVAGGAGP 167

Query: 147 SQFSGEQL-------------------------ATLIFTSGSTGTPKAVAHTHQQHLVSA 181
             F    L                           LI+TSG+TG PK V HT      + 
Sbjct: 168 DAFEASLLDPALDAEVPAIREISARDRSDANAVCQLIYTSGTTGEPKGVMHTANTMYSNL 227

Query: 182 RGLLNKFAFTESDSWLLSLPLYHISG--------------VAILYRWLAVGATLKIGTGD 227
                +    ++D  L++ P+ H +G              + ++  W    A   I    
Sbjct: 228 IAYAGRLGLGDADVVLMASPMAHQTGFMYGLLMPFMLKARMVLMDSWDKALAARLIAQEG 287

Query: 228 LQNDIAGVTHASLVPTQLKRLLDSSSPLTLKRVLLGGSHIPVELAQMA----ATRGIDTW 283
           +   +A       +   ++ L   SS L +   L  G+ IP  L + A     T+ I  W
Sbjct: 288 VTFTMASTPFLMDITNTVEELGTDSSSLRI--FLCAGTAIPGVLVERARKVLGTKIISAW 345

Query: 284 LGYGMTEAASTVTAKRVD----GLAGNGELLEHRELRL-----------VDGRIFIAGKT 328
              GMTE  +       D     +  +G +L   EL++            +G +F+ G +
Sbjct: 346 ---GMTENGAVTVVSPSDPDERSINTDGFVLPGMELQIRGADGAALPVGQEGALFVRGCS 402

Query: 329 LAQGYYRQGQLVPLTNEQGWFDSKDLGRWQGNNLL-IDGRADNLFISGGENVHCEEIEAV 387
              GY ++ Q    T+ +GWFD+ D+ R      + I GR  ++ I G EN+   EIE+V
Sbjct: 403 NFGGYLKRPQW-NATDAEGWFDTGDIARIDEKGYIRICGRTKDVIIRGAENLPVVEIESV 461

Query: 388 LNQHPHVQVAIVIPVQDSEFGARPVAVIRSEA 419
           L +HP +Q   ++   D   G R  A +  +A
Sbjct: 462 LYKHPSIQQVAIVAYPDERLGERACAFVVPKA 493