Pairwise Alignments

Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  103 bits (258), Expect = 1e-26
 Identities = 118/441 (26%), Positives = 190/441 (43%), Gaps = 54/441 (12%)

Query: 17  RDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACT 76
           R P+ V L   G T T+  L +     A+ L   GVR  + V LV +N    +   +AC+
Sbjct: 17  RTPEAVFLFEPGGTTTYAALQAMTETAAQDLLAAGVRPTDRVVLVAENCAAHIALLMACS 76

Query: 77  QVGA----LCAFLAPQPLARLQEK-------LATLYAEQSPKHLWLAPSCALSEEDITAL 125
           ++GA    + A ++P  +A + E+         T  +E + KH   A +   +   +   
Sbjct: 77  RIGAWSCGVNARMSPGEIAAIAERADARLCCFTTGASEAAGKHAQRAGAVPSALAGVM-- 134

Query: 126 NAHRLSLPDERDESVGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLL 185
              R +  DE     G     +       A +IFTSG++GTPK V  +H+  L   R   
Sbjct: 135 ---RSATRDEARIEPGPALADT-------AAIIFTSGTSGTPKGVMVSHRGLLHFGRVSA 184

Query: 186 NKFAFTESDSWLLSLPLYHISGV-AILYRWLAVGATL----KIGTGDLQNDIAGVTHASL 240
              A +E D     LP+ HI G+  +L   L  GA+L         D+   +A    ++L
Sbjct: 185 GVRALSERDRAYAFLPMTHIFGIGTVLMAALTGGASLVLRGSFSPADMLQALAHEEVSNL 244

Query: 241 V--PTQLKRLL---DSSSPLT----LKRVLLGGSHIPVELAQ-MAATRGIDTWLGYGMTE 290
           +  PT   RLL   DS   +     L+ V  G + +   L Q +    G     GYG++E
Sbjct: 245 LGPPTMYARLLAHIDSERMVPRFPHLRYVYTGSAPLDPALKQRVEGLFGQPLHYGYGLSE 304

Query: 291 AASTVTAKRVDGLAGN---GELLEHRELRLVD-----------GRIFIAGKTLAQGYYRQ 336
            A +V   R +    +   G  +E  E R+V            G I++ G  L  GY+R 
Sbjct: 305 YAGSVFLTRTEAPRSDTAAGHAVEGGEARIVSLEGHDAAPGDTGEIWLRGPGLMLGYFRD 364

Query: 337 G-QLVPLTNEQGWFDSKDLGRWQGNN-LLIDGRADNLFISGGENVHCEEIEAVLNQHPHV 394
                 +    GW+ + DLGR+  +  L + GR   + I  G NV+  E+EAV+ +   V
Sbjct: 365 AVATAQVMRPGGWYATGDLGRFGPDGALFVVGRLKEMIIRSGFNVYPAEVEAVIGRFGGV 424

Query: 395 QVAIVIPVQDSEFGARPVAVI 415
            +  V+ V +++   + VA +
Sbjct: 425 HLCAVVGVPEADGNEQIVAFV 445