Pairwise Alignments

Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  109 bits (272), Expect = 3e-28
 Identities = 122/470 (25%), Positives = 190/470 (40%), Gaps = 64/470 (13%)

Query: 17  RDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACT 76
           RD    AL   GQ+L +  LD+Q+   A AL+  G++ G+V+ +     L   + FL   
Sbjct: 24  RDAAHTALLLDGQSLDYAALDAQMDRVAAALQRDGLKPGDVIAISAATSLGYAVVFLGAV 83

Query: 77  QVGALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALNAHRLSLPDER 136
           + G   A LAP       E LA + A+   +  ++    A+ +         R++L D  
Sbjct: 84  RAGVAVAPLAPD---STPEGLAAMVADSGVQLFFVDE--AVGQATAGTPGVPRIALDDSG 138

Query: 137 DES--------VGGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLLNKF 188
             +         G +    +   +    +I++SG+TGTPK +   H       + L    
Sbjct: 139 VGAPLSGWLAPAGAQPEPVRLQPDAPFNIIYSSGTTGTPKGIMMPHAFRWAQVK-LFTSL 197

Query: 189 AFTESDSWLLSLPLYHISGVAILYRWLAVGATL----KIGTGDLQN--DIAGVTHASLVP 242
            +      L+S+PLY    ++  +  L++GA +    K   G           TH+ +VP
Sbjct: 198 GYGPDAVTLVSIPLYSNMTLSSFFPALSLGAKVVLMRKFDAGGYLELAQAHRATHSMMVP 257

Query: 243 TQLKRLL-----DSSSPLTLKRVLLGGSHIPVELAQMAATRGIDTWLG-----YGMTEAA 292
            Q +R++     D     + +    G +  PV L      R    W G     YGMTE  
Sbjct: 258 VQFQRIMAWPDFDRYDLSSFRMKSCGSAPFPVALKADVLAR----WPGGLTEYYGMTEGG 313

Query: 293 STVTA---KRVDGLAGNGELLEHRELRLVD-----------GRIFIAGKTLAQGYYRQGQ 338
                   +R D L   G+     ++R++D           G I     T+  GY+    
Sbjct: 314 GVCALPAHERPDKLHTVGKPAPGHDMRVIDDEGRELPRGDIGEIVGRSGTMMVGYH---N 370

Query: 339 LVPLTNEQGWFD--------SKDLGRW--QGNNLLIDGRADNLFISGGENVHCEEIEAVL 388
           L   T E  WFD        S D GR+   G  +L+D + D + ISGG NV+  ++EAVL
Sbjct: 371 LPQKTAEAEWFDAEGRRFIRSGDTGRFDEDGYLVLLDRKKD-MIISGGFNVYPVDLEAVL 429

Query: 389 NQHPHVQVAIVIPVQDSEFGARPVA--VIRSEAEWCQAIGDTWCQGKLEK 436
             HP V  A V  V    +G  P+A  V+R  A         W   +L K
Sbjct: 430 RSHPDVDEAAVFGVPSQRWGESPMACVVLREAATVAPDALREWANERLGK 479