Pairwise Alignments

Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 109/431 (25%), Positives = 175/431 (40%), Gaps = 41/431 (9%)

Query: 16  ERDPKQV--ALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFL 73
           +R P  V    +  GQ LT+  L       A  L   G R G+ +++V  N L T+   L
Sbjct: 17  QRQPHAVYARATETGQHLTYGELARGCRRVAAVLHGAGARPGDTISVVMPNGLQTLRLLL 76

Query: 74  ACTQVGALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALNAHRLSL- 132
                G     + P  L    E++  + A    + + +AP       +I       +++ 
Sbjct: 77  GAMHGGLR---VNPVNLLSQPEQMRYVLAHADCRVVCVAPEWEARVREIVQAFDRPVTVL 133

Query: 133 -PDERDESVGGEKVSSQFS-----GEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGLLN 186
             D   E + GE  +   +      + +A L++TSG+TG PK V  + +    +A  +  
Sbjct: 134 VVDPEAEVLPGETEAPAVAVPPPLPDAVALLMYTSGTTGMPKGVMLSQRNLAANAYAISA 193

Query: 187 KFAFTESDSWLLSLPLYHISGVAI-LYRWLAVGATL----KIGTGDL--QNDIAGVTHAS 239
           +     SD  L  LPLYHI+   + +   LA G +L    K   G    Q      +  +
Sbjct: 194 EHGLRSSDRVLAVLPLYHINAFTVTMLAPLAHGGSLAMPPKFSAGRFWEQATQTQCSWIN 253

Query: 240 LVPTQLKRLLDSSSP-----LTLKRVLLGGSHIPVE-LAQMAATRGIDTWLGYGMTEAAS 293
           LVPT +  LL+   P     L ++      + +P E L       GI      G+TE A+
Sbjct: 254 LVPTMISYLLEGPKPPLAQTLAIRFCRSASAALPPEHLRAFEQKFGIGIVETMGLTETAA 313

Query: 294 TVTAKRVDGLA--------GNGELLEHRELRL------VDGRIFIAGKTLAQGYYRQGQL 339
              +  +D  A         +G +    + +L      V G + I G  +  GYY+  + 
Sbjct: 314 PSFSNPMDPAARKLGSVGRASGCMAGVVDAKLSAVPDGVTGELVIRGPNVMLGYYKNEEA 373

Query: 340 VPLT-NEQGWFDSKDLG-RWQGNNLLIDGRADNLFISGGENVHCEEIEAVLNQHPHVQVA 397
              +    GW  + DLG R +     + GR   L I GGEN+   EI+  L +HP V+ A
Sbjct: 374 TRASFTPDGWLRTGDLGHRDEDGFFFVTGRIKELIIKGGENIAPREIDEALMRHPAVREA 433

Query: 398 IVIPVQDSEFG 408
             + V D  +G
Sbjct: 434 AAVGVPDRHYG 444