Pairwise Alignments

Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  100 bits (250), Expect = 9e-26
 Identities = 121/504 (24%), Positives = 207/504 (41%), Gaps = 62/504 (12%)

Query: 15  LERDPKQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLA 74
           +++ P +VA+  AG+T +++    +VA  A ALR  G++ G+ V ++  N    + + +A
Sbjct: 11  VQQHPDKVAVRFAGRTRSFRDYADRVARLAGALRRLGMQPGDRVAMLALNSDRYLEYQMA 70

Query: 75  CTQVGALC-----AFLAPQPLARLQEKLAT--LYAEQSPKHLWLAPSCALSEEDITALNA 127
               G +       + A + L  L++  +T  L  E     +      A S  ++     
Sbjct: 71  VPWGGGVLNPCNIRWSAAEILYSLEDSGSTILLVDENFRALVEQMRGQATSLREVIYCGD 130

Query: 128 HRLSLPDERDESV---GGEKVSSQFSGEQLATLIFTSGSTGTPKAVAHTHQQHLVSARGL 184
             L       E++         +    E LA + +T G+TG PK V  +H     S    
Sbjct: 131 GALPAGMHGYEALIDAAAPVPDTARRDEDLAGIFYTGGTTGFPKGVMLSHTNICSSGFAA 190

Query: 185 LNKFAFTESDSWLLSLPLYHISGVAILYRWLAVGATLKI----GTGDLQNDIAG--VTHA 238
           L +       S+L + P++H++ + +       G+T  I        + N IA   VTHA
Sbjct: 191 LGEGLAPPDSSYLHAAPMFHLADMGLATPHWFQGSTHVIVPSFSPEAVLNAIAADRVTHA 250

Query: 239 SLVPTQLKRLLDSSSPL------TLKRVLLGGSHIPVELAQ--MAATRGIDTWLGYGMTE 290
            LVPT ++ L+D  S        +L+ +  G S I   +    M A  G++    YGMTE
Sbjct: 251 LLVPTMIQMLVDHPSMREPRDLRSLRCITYGASPISEAVLNRAMEAFPGVEFAQAYGMTE 310

Query: 291 AASTVT----------AKRVDGLAGNGELLEHRELRLVD-----------GRIFIAGKTL 329
            +   T           ++   L   G      E+R+VD           G + + G  +
Sbjct: 311 LSPIATINPPSNHTAEGRKRGKLRSAGRASYCMEVRIVDADGAEVPRGTVGEVAVRGPNV 370

Query: 330 AQGYYRQGQLVPLTNEQGWFDSKDLGRWQGNN--LLIDGRADNLFISGGENVHCEEIEAV 387
            QGY+ + +        GW  + D G +  ++  + +  R  ++ ISGGENV+  E+E  
Sbjct: 371 MQGYWNKPEQTAAAVRDGWMHTGD-GAYMDDDGYIFVVDRLKDMIISGGENVYSAEVENA 429

Query: 388 LNQHPHVQVAIVIPVQDSEFG--------ARPVAVIRSEAEWCQAIGDTWCQGKLEKFKW 439
           +NQHP V    VI +   E+G         +P   IR E           C+  +  +K 
Sbjct: 430 INQHPAVAACAVIGIPSDEWGEAVHAALVLKPGQGIRPEELIAH------CKTLIASYKC 483

Query: 440 PIMYCLLPDALLDGGIKVSRAAVK 463
           P    +L    L G  KV +  ++
Sbjct: 484 PRSVAVLDALPLSGAGKVLKTKLR 507