Pairwise Alignments

Query, 476 a.a., o-succinylbenzoate--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., medium-chain fatty-acid--CoA ligase from Escherichia coli ECRC62

 Score =  108 bits (269), Expect = 6e-28
 Identities = 112/475 (23%), Positives = 195/475 (41%), Gaps = 59/475 (12%)

Query: 20  KQVALSHAGQTLTWQVLDSQVAHYAKALREQGVRSGEVVTLVGKNHLHTVLWFLACTQVG 79
           K   + + G + T+  LD   +  A  +  +G+ SG+ +           + +LAC + G
Sbjct: 4   KIAVVDNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKTG 63

Query: 80  ALCAFLAPQPLARLQEKLATLYAEQSPKHLWLAPSCALSEEDITALNAHRLSLPDERDES 139
           A+   L P      +E        +    ++ AP+       +  +   +  LP +  + 
Sbjct: 64  AVSVPLLPS----WREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLP-QLQQI 118

Query: 140 VGGEKVSSQFS---------------------GEQLATLIFTSGSTGTPKAVAHTHQQHL 178
           VG +K++   S                     G++LA ++FTSG+ G PK V  TH   L
Sbjct: 119 VGVDKLAPATSSLSLSQIIADNTSLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNIL 178

Query: 179 VSARGLLNKFAFTESDSWLLSLPLYH----ISGVAILYRWLAVGATLKIGTGDL------ 228
            S R    +   T  D +++  PL H    + GV   +   A    L I T D       
Sbjct: 179 ASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLE 238

Query: 229 QNDIAGVTHASLVPTQLKRLLDS--SSPLTLKRVLLGGSHIPVELAQMAATRGIDTWLGY 286
           Q     +  A+     L  +L+   +    L+  L GG+ IP ++A+    RGI     Y
Sbjct: 239 QQRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIPKKVARECQQRGIKLLSVY 298

Query: 287 GMTEAASTVTAKRVDGLA----GNGELLEHRELRLVD-----------GRIFIAGKTLAQ 331
           G TE++        D L+     +G      E+++VD           G     G  +  
Sbjct: 299 GSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFM 358

Query: 332 GYYRQGQLVP-LTNEQGWFDSKDLGRW-QGNNLLIDGRADNLFISGGENVHCEEIEAVLN 389
           GY+ + +L     +E+GW+ S DL R  +   + I GR  ++ + GGEN+   E+E +L 
Sbjct: 359 GYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILL 418

Query: 390 QHPHVQVAIVIPVQDSEFGARPVAVIRSEAEW----CQAIGDTWCQGKLEKFKWP 440
           QHP +  A V+ + D   G R  A +  +A       + +   + + ++ K+K+P
Sbjct: 419 QHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKYP 473