Pairwise Alignments

Query, 387 a.a., benzoate transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., Inner membrane protein YdcO from Escherichia fergusonii Becca

 Score =  271 bits (693), Expect = 2e-77
 Identities = 142/365 (38%), Positives = 212/365 (58%)

Query: 11  LSAGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSILYSWFYKTPIV 70
           L AGF  VL+GY SS  I+ QAA  +GA   QI  W+  LG+ MG++++  + +Y+ P++
Sbjct: 11  LLAGFLAVLIGYASSAAIIWQAAIVAGATTAQISGWMTALGLAMGVSTLTLTLWYRVPVL 70

Query: 71  TAWSTPAAVMLAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKIPVPLGTAMLG 130
           TAWSTP A +L       +L   IG F+ +  L  L G+     R +  IP  L  AML 
Sbjct: 71  TAWSTPGAALLVTGLQGLTLNEAIGVFIVTNVLIVLCGITGLFARLMRIIPHSLAAAMLA 130

Query: 131 AILLPFCAKAFTPLTDTPALFALLFTSYLLAKHLVPRYTMLVLLLVSLGSALALGSFQHA 190
            ILL F  +AF  L     L   +   +L  + + PRY ++  +++ +   +A G     
Sbjct: 131 GILLRFGLQAFASLDGQFTLCGSMLLVWLATRAVAPRYAVIAAMIIGIVIVIAQGDVVTT 190

Query: 191 DLALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYDAPIKPILVGT 250
           D+  +   P ++ P+F +   L++ALPL+L+TM SQN PGIA +K+  Y AP+ P++V T
Sbjct: 191 DVVFKPVLPTYIPPDFSFAHSLSVALPLFLVTMASQNAPGIAAMKAAGYSAPVSPLIVFT 250

Query: 251 GLATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLLAGIFAALVVN 310
           GL  L+ +PFG +SV +AAI+AAIC + +   DK QR+ A   AG FYL+AG+F + +  
Sbjct: 251 GLLALVFSPFGVYSVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLIAGLFGSAITG 310

Query: 311 LFLALPKPISAMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGATLFGMSATLI 370
           +  ALP     MLAGLALL T+   L  A   +  R+ A++ F++T SG TLFG+ +   
Sbjct: 311 MMAALPVSWIQMLAGLALLSTIGGSLYQALHNERERDAAVVAFLVTASGLTLFGIGSAFW 370

Query: 371 GLVIG 375
           GL+ G
Sbjct: 371 GLIAG 375