Pairwise Alignments

Query, 387 a.a., benzoate transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., Inner membrane protein YdcO from Azospirillum sp. SherDot2

 Score =  242 bits (618), Expect = 1e-68
 Identities = 137/380 (36%), Positives = 210/380 (55%), Gaps = 2/380 (0%)

Query: 7   NLSH-LSAGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSILYSWFY 65
           +L+H + AG  +V+V Y  + ++V QAA  +G +P    SW+ ++ V +GLT +  SW +
Sbjct: 14  DLTHPIVAGLISVIVNYGGTFILVFQAAKVAGLSPELTASWVWSVSVGVGLTGLFLSWRF 73

Query: 66  KTPIVTAWSTPAAVMLAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKIPVPLG 125
           + PI+TAWSTPAA  L  +         +GA+M S   F   G+     + +  IP  + 
Sbjct: 74  REPIITAWSTPAAAFLVTALATTPYAEAVGAYMISAVAFVALGLSGYFEKVIRLIPPGIA 133

Query: 126 TAMLGAILLPFCAKAFTPLTDTPALFALLFTSYLLAKHLVPRYTMLVLLLVSLGSALALG 185
           + +L  ILL F   AF   +  P L  LL  +Y++ K    RY ++ +L++ L   L   
Sbjct: 134 SGLLAGILLQFGVGAFGGASVDPLLVGLLIVAYVVLKRFSARYAVVGILVLGLVFLLTQS 193

Query: 186 SFQHADLALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYDAPIKP 245
               + L L  A P++ +P F   A+L++ALPL+LIT+  Q +PG+ +L++  +     P
Sbjct: 194 RVDLSGLKLEFAAPVFTIPAFSLNALLSVALPLFLITLTGQYMPGMLVLRNDGFKTSANP 253

Query: 246 ILVGTGLATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLLAGIFA 305
           I+  TGL +L+ APFG  + N+AAI+AAI    +  +D  +R+ A + AG FY+L G+F 
Sbjct: 254 IVTVTGLGSLIMAPFGSHAFNIAAITAAIATGREAHEDPRKRWIAGIAAGCFYVLVGVFG 313

Query: 306 ALVVNLFLALPKPISAMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGATLFGM 365
             +  +F+A P      LAGLALLGT+   L  A      RE AL+TF+ + +   L G+
Sbjct: 314 VTLAAVFMAFPATFITTLAGLALLGTIGGSLAGAMADPTSREAALITFLASAANIKLLGV 373

Query: 366 SATLIGLVIGL-AYLRLTTR 384
                GLVIGL AYL L  R
Sbjct: 374 GGAFWGLVIGLVAYLVLNGR 393