Pairwise Alignments

Query, 387 a.a., benzoate transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Inner membrane protein YdcO from Acinetobacter radioresistens SK82

 Score =  265 bits (677), Expect = 2e-75
 Identities = 142/364 (39%), Positives = 209/364 (57%)

Query: 13  AGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSILYSWFYKTPIVTA 72
           AGF T LVG + S V+VIQAA   GA   QI SW   LG+ +G++ +  SW +K P+ T+
Sbjct: 16  AGFITFLVGISVSAVLVIQAAQILGATSEQISSWFWALGLGIGISGLFLSWKFKYPVATS 75

Query: 73  WSTPAAVMLAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKIPVPLGTAMLGAI 132
           WST    ++ A+   Y+L   IGAF   G L  + G      +ALS IP  L +AML  +
Sbjct: 76  WSTAGLALIIATGSGYTLYEAIGAFFICGLLTAILGFSGVFKKALSYIPQSLTSAMLAGV 135

Query: 133 LLPFCAKAFTPLTDTPALFALLFTSYLLAKHLVPRYTMLVLLLVSLGSALALGSFQHADL 192
           LL F    F  L         +   Y+L+K + PRY++++ ++  +        F    +
Sbjct: 136 LLKFGIALFASLQTNWGFILSILAIYILSKRIWPRYSIVLTVIGGIAVCPLFMEFHTPVV 195

Query: 193 ALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYDAPIKPILVGTGL 252
              +A P+W+ PEF W +IL LA PL++I M SQ LPGIAM++SY Y   I  ++  TG+
Sbjct: 196 QWSLAQPVWMAPEFSWSSILGLAFPLFVINMASQYLPGIAMIQSYGYKPHINQLIGWTGV 255

Query: 253 ATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLLAGIFAALVVNLF 312
           +  + APFG +SVN+AAISAAI +++ V  D A+RY A +  G FY+L G+FAA + +L 
Sbjct: 256 SQTLLAPFGCYSVNIAAISAAISLDDQVHPDPAKRYIAGMSCGFFYILVGLFAATLTSLL 315

Query: 313 LALPKPISAMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGATLFGMSATLIGL 372
           ++ P+     LAG+AL GT+   +  AF   E RE  L+TF+ + SG    G+ +   GL
Sbjct: 316 MSFPQVFITALAGIALFGTIGHNIALAFHDIEEREATLMTFLFSASGVQFLGIGSAFWGL 375

Query: 373 VIGL 376
           + G+
Sbjct: 376 IFGI 379